Skip to content

Issues: smorabit/hdWGCNA

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

34 Open 291 Closed
34 Open 291 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Question about [my question]Error in !CheckWGCNAName(seurat_obj, wgcna_name) : invalid argument type question Further information is requested
#334 opened Nov 15, 2024 by RGT183
1
Question about multiple spatial samples question Further information is requested
#333 opened Nov 14, 2024 by atrostleSW
2
Question about dendrogram plot question Further information is requested
#332 opened Nov 14, 2024 by laterz-f
1
Question about proportion of genes assigned to grey module question Further information is requested
#331 opened Nov 13, 2024 by ddressman91
1
Analysis of changes in co-expression patterns question Further information is requested
#330 opened Nov 12, 2024 by amingson
2
github installation broken?
#329 opened Nov 11, 2024 by philippstb
2
Error in ConstructPseudobulk (argument is not a matrix) when I don't specify label_col
#327 opened Oct 30, 2024 by ddressman91
2
PlotModuleTraitCorrelation for one trait question Further information is requested
#322 opened Oct 24, 2024 by shiave
1
MetaspotsByGroups ERROR: invalid class “Assay5” object: Layers must be two-dimensional objects
#317 opened Oct 16, 2024 by dylanwudy
1
maybe wrong hub genes orders in PlotKMEs
#315 opened Oct 9, 2024 by rocketeer1998
1
Question about the possibility of using external metacell asssignment question Further information is requested
#310 opened Sep 10, 2024 by pmandros
2
Co-expression module dynamics with pseudotime cannot run the module dynamics graphs
#306 opened Sep 2, 2024 by CamiCalamity
1
no applicable method for 'JoinLayers' applied to an object of class "c('Assay', 'KeyMixin') question Further information is requested
#296 opened Jul 19, 2024 by DLY-2021
4
MetacellsByGroups -> "Error in apply(cell_sample, 1, function(x) { : dim(X) must have a positive length" question Further information is requested
#290 opened Jul 9, 2024 by MJD-BlanckGroup
5
Compatibility of hdWGCNA with Visium HD Data bug Something isn't working question Further information is requested
#286 opened Jun 28, 2024 by wnddl111
3
Seeking parameter suggestions for hdwgcna question Further information is requested
#285 opened Jun 26, 2024 by xjyenjoy81
2
ConstructMetaspots not compatible with Seurat's VisiumV2 class
#278 opened Jun 12, 2024 by ppm1337
6
Error when running "ModuleEigengenes()" with a seurat.v5 object
#271 opened May 30, 2024 by Zweig-Wong
5
Tweaking the number of modules question Further information is requested
#252 opened Apr 4, 2024 by Thapeachydude
2
Error with MetaspotsByGroups and ConstructMetaspots
#250 opened Mar 29, 2024 by liuxiawei
4
Conda Skeleton for Workflow Integration enhancement New feature or request
#229 opened Feb 29, 2024 by shahrozeabbas
1
ModuleFeaturePlot - add split.by option enhancement New feature or request
#227 opened Feb 26, 2024 by ashleshagogate
1
Question about exporting the networks to Metascape enhancement New feature or request question Further information is requested
#223 opened Feb 19, 2024 by DelongZHOU
4
MetaspotsByGroups : Error in as.Graph()
#217 opened Jan 28, 2024 by Prakrithi-P
6
Question about module preservation / reproducibility when creating the modules enhancement New feature or request question Further information is requested
#195 opened Dec 15, 2023 by DelongZHOU
1
ProTip! Add no:assignee to see everything that’s not assigned.