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68 Open 105 Closed
68 Open 105 Closed
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Issues list

Bump genome version to 112
#311 opened Oct 2, 2024 by allumik
'numpy' has no attribute 'typeDict'
#310 opened Sep 6, 2024 by nick-youngblut
7
How to convert the name such as '128843_chr7_5473to5474_10k' to gene symbol?
#308 opened Aug 16, 2024 by Sarah-air
[Housekeeping] Explicitly typing all files!
#303 opened Feb 19, 2024 by akmazian
2
[new feature] Support more ensembl genome, such as plants and fungi
#298 opened Jan 10, 2024 by y9c
3
transcript_support_level attr would cause error when containing space.
#297 opened Jan 2, 2024 by y9c
1
Similar to the list subcommand, a subcommand to list all available release to download is necessary.
#296 opened Dec 29, 2023 by y9c
Update tags
#288 opened Aug 15, 2023 by linqigang888
7
protein_ids_at_locus() gives incorrect results
#286 opened May 8, 2023 by aeschriefer
1
bash: pyensembl: command not found
#285 opened Feb 28, 2023 by JunxiFeng
1
is it possible to find the nearest feature when there is none at the locus
#283 opened Feb 18, 2023 by Cloufield
distance_to_locus is inf for loci on opposite strands, feature or a bug?
#280 opened Feb 15, 2023 by rraadd88
2
gene class should have a method to get its sequence
#270 opened Oct 6, 2022 by antonkulaga
@rraadd88
4
Cannot update Ensembl release
#269 opened Aug 24, 2022 by DDudka9
6
Cannot Access the coding sequence in specific transcript
#267 opened Aug 4, 2022 by HealHer
[How to use with custom data] NCBI human gene model
#265 opened Jun 3, 2022 by damianosmel
1
pip install in conda does not allow for download
#264 opened Apr 20, 2022 by da-i
1
A method for getting length of the overlap between two loci
#260 opened Nov 21, 2021 by integratebio
[Software package citation]
#259 opened Nov 17, 2021 by damianosmel
Genbank file with feature output for gene?
#258 opened Nov 14, 2021 by harijay
"genome" was provided but still raise an error
#254 opened May 23, 2021 by limin321
.complete method of Transcript class return a wrong result for some transcript ids.
#252 opened May 17, 2021 by y9c
How to run pyensembl using multiple threads?
#251 opened May 6, 2021 by damianosmel
1
How to select mouse database?
#250 opened Apr 19, 2021 by zhoutianrui-tongji
1
Error when running top_priority_effect() second time in pyramid webapp
#248 opened Mar 10, 2021 by pajanne
ProTip! What’s not been updated in a month: updated:<2024-10-16.