Releases: nlesc-nano/CAT
Releases · nlesc-nano/CAT
CAT 1.1.0
CAT 1.0.0
CAT 0.11.1
What's Changed
Full Changelog: 0.11.0...0.11.1
CAT 0.11.0
What's Changed
- ENH: Add the
remove_anchor_hydrogens
option to the cone-angle workflow by @BvB93 in #240 - ENH: Minor improvements to computing the ligand conformer optimization cost function by @BvB93 in #241
- TST: Re-enable windows tests by @BvB93 in #242
- TST,ENH: Add a function for checking if the coordinates of two molecules are equal within a given tolerance by @BvB93 in #243
- TST: Let
assert_mol_allclose
check for both bonds and lattices as well as atomic coordinates by @BvB93 in #244 - ENH: Improve the ligand conformation search by @BvB93 in #246
- BUG: Fix the CAT logger failing to write to stdout by @BvB93 in #247
- ENH: Set the default Indium (formal) charge to 3+ by @BvB93 in #248
- BUG: Fix the ligand conformation optimizer failing for certain cyclic systems by @BvB93 in #249
- BUG: Only disable the rdkit
SANITIZE_ADJUSTHS
when strictly required by @BvB93 in #250 - BUG: Fix the
anchor.kind = "mean"
keyword being broken by @BvB93 in #252 - REL: Prepare for CAT 0.11.0 release by @BvB93 in #254
Full Changelog: 0.10.6...0.11.0
CAT 0.10.6
What's Changed
- ENH: Allow multiple values for the bulkiness latice spacing by @BvB93 in #233
- BUG: FIx an issue wherein optimized geometries were not correctly written to the .hdf5 file by @BvB93 in #234
- BUG: Ensure that the ligand is properly aligned after PLAMS optimizations by @BvB93 in #235
- ENH: When optimizing ligand conformations, fully relax the geometry before computing the cost function by @BvB93 in #237
- ENH: Improve the optimized geometries of linear ligands by @BvB93 in #238
- ENH: Add a new workflow for computing ligand cone angles by @BvB93 in #239
Full Changelog: 0.10.5...0.10.6
CAT 0.10.5
What's Changed
- BUG: Fixed an issue where certain properties could not be extracted from CP2K frequency jobs by @BvB93 in #231
- ENH: Add the
anchor.multi_anchor_filter
option by @BvB93 in #232
Full Changelog: 0.10.4...0.10.5
CAT 0.10.4
CAT 0.10.3
What's Changed
- REL: Update
master
branch after 0.10.2 release by @BvB93 in #223 - ENH: Allow
core.allignment: "surface"
for cores with <4 anchor atoms by @BvB93 in #224 - ENH: Allow the BDE workflow to parse qmflows-style generic keywords by @BvB93 in #225
- BUG: Fix the BDE
core_atom
andlig_count
keys not being optional by @BvB93 in #226 - ENH: Expose a keyword for the BDE XYn-preoptimization by @BvB93 in #227
Full Changelog: 0.10.2...0.10.3
CAT 0.10.2
What's Changed
- REL: Update master branch after release (0.10.1) by @BvB93 in #214
- ENH: Allow specifying dummy atoms as anchor group by @BvB93 in #215
- ENH: Allow specifying the format type of the anchor
group
by @BvB93 in #216 - TST: Add a mypy run to the linting checks by @BvB93 in #217
- BUG: Disable the
PNG
andPNG_FILE
anchor format options for RDKit <2020.09.01 by @BvB93 in #218 - BUG: Fix an issue wherein anchor-group-parsing could fail for mono-atomic anchors by @BvB93 in #219
- BLD: Add minimum versions to more packages by @BvB93 in #220
- BLD: Allow installing
CAT
without the use of conda by @BvB93 in #221 - REL: Prepare for CAT 0.10.2 by @BvB93 in #222
Full Changelog: 0.10.1...0.10.2
CAT 0.10.1
What's Changed
- TST: Move test dependencies to pypi by @BvB93 in #201
- ENH: Add the
angle_offset
option for manually rotating ligand vectors by @BvB93 in #202 - ENH: Allow specification of a fixed ligand-vector dihedral angle by @BvB93 in #204
- TST: Improve the test coverage for the anchor input parsing by @BvB93 in #205
- TST: Update coordinates for RDKit 2021.03.4 by @BvB93 in #206
- MAINT: Do not modify global logging settings when configuring the CAT logger by @BvB93 in #207
- ENH,WIP: Add an option for inverting the core vectors by @BvB93 in #208
- ENH: Bring the core anchoring options up to par with its ligand-based counterpart by @BvB93 in #211
- MAINT: Backport the PLAMS <= 1.5.1
Molecule.get_formula
method by @BvB93 in #212 - TST: Add a dedicated CI job for pre-releases by @BvB93 in #209
- DOC: Do not use conda when building RTD docs by @BvB93 in #213
Full Changelog: 0.10.0...0.10.1