Skip to content

Releases: nanoporetech/fast5_research

v1.2.23

17 Mar 16:10
cf72da3
Compare
Choose a tag to compare
  • Build using python3.5
  • Fix bug with shuffle option within fast5.py
  • Allow None as an input to BulkFast5.get_raw
  • Allow summary file to use strand_duration instead of strand as column name

v1.2.22

25 Aug 09:16
e3f6fc8
Compare
Choose a tag to compare
  • Update way reads classifications are parsed from the bulk to use modal classification as Minknow now does.

v1.2.21

20 Jul 08:43
Compare
Choose a tag to compare
  • Add filter_from_bam program to build filter file from bam.

v1.2.20

04 Dec 16:13
Compare
Choose a tag to compare
  • Add index_reads program to build read_id->file index tsv file.

v1.2.19

26 Sep 14:40
Compare
Choose a tag to compare
  • Add program to produce read summary text file from Bulk .fast5

v1.2.18

13 Jun 13:10
573e870
Compare
Choose a tag to compare
  • Allow extract_reads to extract only reads present in a given read_summary.txt

v1.2.17

08 May 14:35
Compare
Choose a tag to compare

v1.2.17

  • Allow filter_reads to be given full filename/read_id information

Calculate read drift

14 Mar 15:39
Compare
Choose a tag to compare
  • Calculate drift from read table as it will no longer be present in the read table.

v1.2.14

07 Mar 15:41
a3a67c9
Compare
Choose a tag to compare

Bug fix release

  • Fix issue affecting conversion of |u1 dtypes

v1.2.13

28 Feb 17:06
Compare
Choose a tag to compare
  • Use filename if possible when extracting reads