Molecular Dynamics Simulation of Alanine Dipeptide and Dihedral Angle Analysis
Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides in the Top8000 PDB data set.
A simple script to generate Ramachandran plot from Pymol.
Modules for PDB Data parsing and Ramachandran Analysis.
Python implementation of the Ramachandran plot
Extensive clustering analysis of protein conformation, based on the angle study of two bonds of the main chain of proteins, phi and psi angles. Using scikit-learn. Developed with my coding friend @jibrilsharafi
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