iontorrent

Here are 6 public repositories matching this topic...

nf-core / ampliseq

Amplicon sequencing analysis workflow using DADA2 and QIIME2

workflow pipeline nextflow metagenomics pacbio edna microbiome iontorrent illumina metabarcoding 16s rrna its 18s taxonomic-classification amplicon-sequencing qiime2 nf-core taxonomic-profiling

Updated Nov 15, 2024
Nextflow

mazzalab-ieo / recallme

Star

Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer

bioinformatics genomics ngs vcf iontorrent

Updated Dec 18, 2023
R

stevekm / reportIT

Star

IonTorrent variant reporting pipeline for clinical interpretation of cancer panel results

pipeline analysis panel reporting genes iontorrent visualizations iontorrent-server igv

Updated Oct 2, 2018
Python

iliapopov17 / The-shadow-of-HIV

Star

🦠Research project in Bioinformatics Institute 2023-2024

snakemake dna beta-diversity iontorrent hiv samtools bowtie2 relative-abundances alpha-diversity kraken2 differential-abundance-analysis maaslin2

Updated Aug 16, 2024
Jupyter Notebook

NYU-Molecular-Pathology / automation-scripts

Star

repo for automation python/R scripts

automation python-script iontorrent

Updated Dec 9, 2022
Python

t-neumann / sff-adaptersplitter

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Demultiplex 454 Genome Sequencer reads from a SFF file

bioinformatics sequencing barcode computational-biology sff iontorrent de-multiplexing

Updated Aug 1, 2016
C++

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iontorrent

Here are 6 public repositories matching this topic...

nf-core / ampliseq

mazzalab-ieo / recallme

stevekm / reportIT

iliapopov17 / The-shadow-of-HIV

NYU-Molecular-Pathology / automation-scripts

t-neumann / sff-adaptersplitter

Improve this page

Add this topic to your repo