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Add initial notes on possible runner design for scaling the analysis
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# predicTCR Runner | ||
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This will be a script or Docker image to do the Python+R analysis. | ||
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It needs to | ||
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- Regularly poll the predicTCR web service to ask if there is a sample that needs processing | ||
- If one is available | ||
- claim the sample | ||
- download the input files | ||
- run the analysis | ||
- upload the results | ||
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Authentification can be done via a long-lived JWT token that admins can request online. | ||
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Deployment could be done with a Docker image and a docker-compose config. | ||
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Admin would set environment variables to provide | ||
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- path to model weights | ||
- JWT token |