Add admin buttons to delete and resubmit samples #66
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| concurrency: | |
| group: publish-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| web-frontend: | |
| name: "Frontend :: node ${{ matrix.node-version }}" | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| node-version: [22] | |
| defaults: | |
| run: | |
| working-directory: ./frontend | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: pnpm/action-setup@v4 | |
| with: | |
| version: 8 | |
| - uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{ matrix.node-version }} | |
| cache: "pnpm" | |
| cache-dependency-path: frontend/pnpm-lock.yaml | |
| - run: pnpm install | |
| - run: pnpm run lint | |
| - run: pnpm run build | |
| - run: pnpm run test:unit:ci | |
| web-backend: | |
| runs-on: ubuntu-latest | |
| name: "Backend :: Python ${{ matrix.python-version }}" | |
| strategy: | |
| matrix: | |
| python-version: ["3.12"] | |
| defaults: | |
| run: | |
| working-directory: ./backend | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - run: pip install -e .[tests] | |
| - run: python -m pytest --cov=predicTCR_server --cov-report=xml -sv | |
| - uses: codecov/codecov-action@v4 | |
| with: | |
| files: ./backend/coverage.xml | |
| name: backend | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| fail_ci_if_error: true | |
| verbose: true | |
| web-docker: | |
| runs-on: ubuntu-latest | |
| name: "Docker website" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - run: docker compose build | |
| - uses: docker/login-action@v3 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| - run: | | |
| echo $PREDICTCR_DOCKER_IMAGE_TAG | |
| docker compose build | |
| docker compose push | |
| if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| env: | |
| PREDICTCR_DOCKER_IMAGE_TAG: ${{ github.sha }} | |
| - run: | | |
| echo $PREDICTCR_DOCKER_IMAGE_TAG | |
| docker compose build | |
| docker compose push | |
| if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| env: | |
| PREDICTCR_DOCKER_IMAGE_TAG: "latest" | |
| runner-python: | |
| runs-on: ubuntu-latest | |
| name: "Runner :: Python ${{ matrix.python-version }}" | |
| strategy: | |
| matrix: | |
| python-version: ["3.12"] | |
| defaults: | |
| run: | |
| working-directory: ./runner | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - run: pip install -e .[tests] | |
| - run: pytest -sv | |
| runner-docker: | |
| runs-on: ubuntu-latest | |
| name: "Docker runner" | |
| defaults: | |
| run: | |
| working-directory: ./runner | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - run: docker compose build | |
| # - uses: docker/login-action@v3 | |
| # with: | |
| # registry: ghcr.io | |
| # username: ${{ github.actor }} | |
| # password: ${{ secrets.GITHUB_TOKEN }} | |
| # if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| # - run: | | |
| # echo $PREDICTCR_DOCKER_IMAGE_TAG | |
| # docker compose build | |
| # docker compose push | |
| # if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| # env: | |
| # PREDICTCR_DOCKER_IMAGE_TAG: ${{ github.sha }} | |
| # - run: | | |
| # echo $PREDICTCR_DOCKER_IMAGE_TAG | |
| # docker compose build | |
| # docker compose push | |
| # if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| # env: | |
| # PREDICTCR_DOCKER_IMAGE_TAG: "latest" |