Pinned Loading

1. jetson_nanopore_sequencing jetson_nanopore_sequencing Public

   A place to collate notes and resources of our journey into porting nanopore sequencing over to accessible, portable technology.

   107 11

2. guppy_parameter_optimiser guppy_parameter_optimiser Public

   A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate

   Shell 31 4

3. illumina450k_filtering illumina450k_filtering Public

   A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays

   29 24

4. a collection of my notes while worki... a collection of my notes while working on nanopore basecalling on the Jetson Xavier

   1

   # Jetson Xavier basecalling notes

   2

   3

   ## initial basecalling runs 

   4

   5

   #### 'fast' flip-flop calling on the Jetson Xavier

5. diagnostics_exome_reporting diagnostics_exome_reporting Public

   Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.

   Shell 14 10

6. WES_ShinyDiscover WES_ShinyDiscover Public

   A Shiny interface to filter and identify variants of interest from whole exome data

   CSS 9 5