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ci: remove all custom library installations for macOS
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jorainer committed Aug 1, 2024
1 parent e93fa63 commit 2756536
Showing 1 changed file with 25 additions and 25 deletions.
50 changes: 25 additions & 25 deletions .github/workflows/check-bioc.yml
Original file line number Diff line number Diff line change
Expand Up @@ -126,31 +126,31 @@ jobs:
if: matrix.config.os == 'macOS-latest'
run: |
## Enable installing XML from source if needed
brew install libxml2
echo "XML_CONFIG=/usr/local/opt/libxml2/bin/xml2-config" >> $GITHUB_ENV
## Required to install magick as noted at
## https://github.com/r-lib/usethis/commit/f1f1e0d10c1ebc75fd4c18fa7e2de4551fd9978f#diff-9bfee71065492f63457918efcd912cf2
brew install imagemagick@6
## For textshaping, required by ragg, and required by pkgdown
brew install harfbuzz fribidi
brew install libgit2
## Helps compile RCurl from source
## brew uninstall curl
## required for ncdf4 - can not use the homebrew one because that uses GCC
## Use pre-compiled libraries from https://mac.r-project.org/libs-4/
curl -O https://mac.r-project.org/libs-4/netcdf-4.7.4-darwin.17-x86_64.tar.gz
tar fvxzm netcdf-4.7.4-darwin.17-x86_64.tar.gz -C /
rm netcdf-4.7.4-darwin.17-x86_64.tar.gz
curl -O https://mac.r-project.org/libs-4/hdf5-1.12.0-darwin.17-x86_64.tar.gz
tar fvxzm hdf5-1.12.0-darwin.17-x86_64.tar.gz -C /
rm hdf5-1.12.0-darwin.17-x86_64.tar.gz
curl -O https://mac.r-project.org/libs-4/szip-2.1.1-darwin.17-x86_64.tar.gz
tar fvxzm szip-2.1.1-darwin.17-x86_64.tar.gz -C /
rm szip-2.1.1-darwin.17-x86_64.tar.gz
# brew install libxml2
# echo "XML_CONFIG=/usr/local/opt/libxml2/bin/xml2-config" >> $GITHUB_ENV
# ## Required to install magick as noted at
# ## https://github.com/r-lib/usethis/commit/f1f1e0d10c1ebc75fd4c18fa7e2de4551fd9978f#diff-9bfee71065492f63457918efcd912cf2
# brew install imagemagick@6
# ## For textshaping, required by ragg, and required by pkgdown
# brew install harfbuzz fribidi
# brew install libgit2
# ## Helps compile RCurl from source
# ## brew uninstall curl
# ## required for ncdf4 - can not use the homebrew one because that uses GCC
# ## Use pre-compiled libraries from https://mac.r-project.org/libs-4/
# curl -O https://mac.r-project.org/libs-4/netcdf-4.7.4-darwin.17-x86_64.tar.gz
# tar fvxzm netcdf-4.7.4-darwin.17-x86_64.tar.gz -C /
# rm netcdf-4.7.4-darwin.17-x86_64.tar.gz
# curl -O https://mac.r-project.org/libs-4/hdf5-1.12.0-darwin.17-x86_64.tar.gz
# tar fvxzm hdf5-1.12.0-darwin.17-x86_64.tar.gz -C /
# rm hdf5-1.12.0-darwin.17-x86_64.tar.gz
# curl -O https://mac.r-project.org/libs-4/szip-2.1.1-darwin.17-x86_64.tar.gz
# tar fvxzm szip-2.1.1-darwin.17-x86_64.tar.gz -C /
# rm szip-2.1.1-darwin.17-x86_64.tar.gz
- name: Install Windows system dependencies
if: runner.os == 'Windows'
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