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brentp committed Apr 5, 2023
1 parent 16dbcf3 commit fb9b20c
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Showing 3 changed files with 3 additions and 3 deletions.
2 changes: 1 addition & 1 deletion src/strpkg/collect.nim
Original file line number Diff line number Diff line change
Expand Up @@ -34,7 +34,7 @@ proc tostring*(s:Support, b:Bounds, chrom:string): string =
result = &"{chrom}\t{b.left}\t{b.right}\t{s.Type}\t{s.SpanningFragmentLength}\t{s.SpanningFragmentPercentile}\t{s.SpanningReadRepeatCount}\t{s.SpanningReadCigarInsertionLen}\t{s.SpanningReadCigarDeletionLen}\t{s.repeat}\t{s.qname}"

proc spanning_fragment*(L:Record, R:Record, bounds:Bounds, support:var Support, frag_sizes: array[4096, uint32]): bool =
doAssert L.start <= R.start
doAssert L.start <= R.start, $(L, R, bounds)
var bound_width = bounds.right.int - bounds.left.int
var slop = bounds.repeat.len - 1
if bound_width < 5: # Add extra slop for very small bounds
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2 changes: 1 addition & 1 deletion src/strpkg/version.nim
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
const strlingVersion* = "0.5.1"
const strlingVersion* = "0.5.2"

# bin file format version
const thisFmtVersion* = 0'i16
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2 changes: 1 addition & 1 deletion strling.nimble
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ template thisModuleFile: string = instantiationInfo(fullPaths = true).filename
# # When the package is installed, the ``src`` directory disappears.
# import strpkg/version as _

version = "0.5.1"
version = "0.5.2"
author = "Harriet and Brent"
description = "Novel STR caller"
license = "MIT"
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