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Add param --quality_type #1525

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Add param --quality_type

Add param --quality_type #1525

Triggered via pull request November 19, 2024 13:44
@d4straubd4straub
opened #801
d4straub:add-param-for-phred-encoding
Status Success
Total duration 51m 7s
Artifacts –

ci.yml

on: pull_request
Matrix: nf-test
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28 errors and 56 warnings
nf-test (latest-everything, docker, test_fasta, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_novaseq, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_novaseq, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_fasta, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_single, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_iontorrent, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_iontorrent, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_single, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_pacbio_its, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_qiimecustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_pacbio_its, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_qiimecustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_reftaxcustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_doubleprimers, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_doubleprimers, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_reftaxcustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_multi, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_multi, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_pplace, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_pplace, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_multiregion, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_multiregion, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_sintax, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_sintax, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_failed, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_failed, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_fasta, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_fasta, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_novaseq, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_novaseq, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_novaseq, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_novaseq, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_fasta, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_fasta, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_single, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_single, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_iontorrent, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_iontorrent, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_iontorrent, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_iontorrent, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_single, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_single, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_pacbio_its, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_pacbio_its, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_qiimecustom, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_qiimecustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_pacbio_its, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_pacbio_its, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_qiimecustom, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_qiimecustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_reftaxcustom, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_reftaxcustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_doubleprimers, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_doubleprimers, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_doubleprimers, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_doubleprimers, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_reftaxcustom, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_reftaxcustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_multi, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_multi, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_multi, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_multi, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_pplace, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_pplace, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_pplace, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_pplace, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_multiregion, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_multiregion, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_multiregion, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_multiregion, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_sintax, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_sintax, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_sintax, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_sintax, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_failed, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test_failed, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_failed, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test_failed, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, docker, test, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test, false)
The following actions use a deprecated Node.js version and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (24.04.2, docker, test, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23