fixup! io: Split Metadata class into TabularFile and File

nextstrain · Feb 3, 2024 · 8d4b9e2 · 8d4b9e2
1 parent 3cf5670
commit 8d4b9e2
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/augur/frequencies.py b/augur/frequencies.py
@@ -85,7 +85,7 @@ def format_frequencies(freq):
 
 def run(args):
     try:
-        metadata_object = Metadata(args.metadata, args.metadata_delimiters, args.metadata_id_columns)
+        metadata_object = Metadata(args.metadata, args.metadata_id_columns, delimiters=args.metadata_delimiters)
     except InvalidDelimiter:
         raise AugurError(
             f"Could not determine the delimiter of {args.metadata!r}. "

diff --git a/augur/refine.py b/augur/refine.py
@@ -215,7 +215,7 @@ def run(args):
             return 1
 
         try:
-            metadata_object = Metadata(args.metadata, args.metadata_delimiters, args.metadata_id_columns)
+            metadata_object = Metadata(args.metadata, args.metadata_id_columns, delimiters=args.metadata_delimiters)
         except InvalidDelimiter:
             raise AugurError(
                 f"Could not determine the delimiter of {args.metadata!r}. "