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change the initial locus specification from 1-{stop} to 1-1000000 per… #33

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Mar 4, 2024
Merged

change the initial locus specification from 1-{stop} to 1-1000000 per… #33

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2 changes: 1 addition & 1 deletion scripts/process_collections.py
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Original file line number Diff line number Diff line change
Expand Up @@ -354,7 +354,7 @@ def add_collections(self, collection_type, genus, species):
"views": [
{
"assembly": lookup,
"loc": f"{ref}:1-{stop}", # JBrowse2 does not allow null loc
"loc": f"{ref}:1-1000000", # JBrowse2 does not allow null loc
"type": "LinearGenomeView",
# "tracks": [
# " gff3tabix_genes " ,
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