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20 Open 9 Closed
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Issues list

Feature: --fast mode
#35 opened Nov 4, 2023 by jfy133
1
Pipeline config - new question: would you like to update another module?
#33 opened Nov 3, 2023 by jfy133
Pipeline config - new question: what walltime would you like to set for the process
#32 opened Nov 3, 2023 by jfy133
Pipeline config - new question: how many CPUs would you like to set for the process
#31 opened Nov 3, 2023 by jfy133
Pipeline config - new question: what memory would you like to set for the process
#30 opened Nov 3, 2023 by jfy133
Pipeline config - new question: what process would you like to configure?
#29 opened Nov 3, 2023 by jfy133
Pipeline config - autodetect: possible modules/processes
#28 opened Nov 3, 2023 by jfy133
Pipeline config - new question: what is the path to a pipeline you wish to make config for (if not nf-core)
#27 opened Nov 3, 2023 by jfy133
Pipeline config - new question: is this for a nf-core pipeline?
#26 opened Nov 3, 2023 by jfy133
Infrastructure config - new question: do you want to specify a certain number of retries
#25 opened Nov 3, 2023 by jfy133
Infrastructure config - new question: do you want to specify a specific scratch/TMPDIR space
#23 opened Nov 3, 2023 by jfy133
1
@georgiesamaha
2
Infrastructure config - new question: do you want to define a global cache directory
#22 opened Nov 3, 2023 by jfy133
@jfy133
Infrastructure config - new question: do you have/want a iGenomes cache
#21 opened Nov 3, 2023 by jfy133
Infrastructure config - autodetect: is a cachedir variable already set, for resuse
#20 opened Nov 3, 2023 by jfy133
1
@jfy133
1
Infrastructure config - autodetect: [nf-core only] try to autoscale default process labels depending on max resources
#19 opened Nov 3, 2023 by jfy133
Infrastructure config - autodetect: [nf-core only?] find maximum resources across all nodes/machine
#18 opened Nov 3, 2023 by jfy133
Infrastructure config - autodetect step: detect options for container/software systems
#17 opened Nov 3, 2023 by jfy133
@jfy133
2
Infrastructure config - new question: is this config for a HPC?
#16 opened Nov 3, 2023 by jfy133
1 of 4 tasks
Saying 'yes' for unique resource for a specific processes asks again what executor to use?
#9 opened Oct 11, 2023 by jfy133
@georgiesamaha
1
Not clear what 'Specify cluster options that should be applied to each process:' means
#8 opened Oct 11, 2023 by jfy133
@georgiesamaha
2
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