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40 Open 47 Closed
40 Open 47 Closed
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Issues list

Update ShEx to use primary input and primary output
#309 opened Mar 13, 2024 by vanaukenk
5 tasks
@vanaukenk
1
Experiment with minimal/"GPAD" ShEx enhancement New feature or request
#306 opened Jan 18, 2024 by kltm
@balhoff
7
Negation in Shapes for CC and Small Molecules
#301 opened Apr 13, 2023 by tmushayahama
2
Add 'small molecule regulator' relations to the MF shape
#299 opened Mar 9, 2023 by ukemi
@vanaukenk @dustine32
2
Remove 'directly activates' after all MF-MF relations are updated in existing models
#298 opened Feb 22, 2023 by vanaukenk
@vanaukenk
Error in gen-project-linkml.yaml on dev branch(?)
#293 opened Dec 12, 2022 by kltm
LinkML Typescript with array
#291 opened Dec 1, 2022 by tmushayahama
Separate branches for dev and for production server
#288 opened Nov 3, 2022 by tmushayahama
3
Add Root MF Shape
#287 opened Oct 28, 2022 by tmushayahama
Change contributor and provider values to IRIs
#286 opened Oct 28, 2022 by balhoff
1
Update ShEx for new MF-MF relations enhancement New feature or request
#280 opened Oct 11, 2022 by vanaukenk
@vanaukenk
Separate out application and shape metadata
#279 opened Oct 6, 2022 by kltm
@tmushayahama
Discuss the JSON schema
#278 opened Oct 6, 2022 by kltm
@balhoff @tmushayahama
@dustine32 @kltm
4
Add GitHub actions to convert GO ShEx to necessary secondary data products
#276 opened Oct 6, 2022 by kltm
@dustine32 @kltm
Explore adding comments to ShEx, to aid extracting information from the schema into secondary data products enhancement New feature or request
#275 opened Oct 6, 2022 by kltm
@balhoff
Update ShEX rules for transporter activity
#273 opened May 24, 2022 by ukemi
1
Add two new model level annotations: “maximal-causal-chain-length” and “display-as-pathway-override”
#272 opened Jan 22, 2022 by kltm
provenance in <GoCamModel> shape question Further information is requested
#267 opened Aug 23, 2021 by balhoff
@vanaukenk @kltm
2
Proposed changes to capture more information about dates in the ShEx metadata
#261 opened Jun 10, 2021 by vanaukenk
@vanaukenk
12
Relax constraints on has-input to allow SO sequence features
#258 opened Feb 26, 2021 by lpalbou
@vanaukenk
Shex error when reporting multiple violations
#257 opened Feb 26, 2021 by lpalbou
@balhoff
3
Remove all instances of 'directly regulates', 'directly positively regulates' and 'directly negatively regulates
#255 opened Feb 11, 2021 by pgaudet
1
4
GP located_in CC error
#254 opened Jan 13, 2021 by tmushayahama
5
Include shapes for models/graphs
#252 opened Nov 16, 2020 by cmungall
3
Add rdfs:seeAlso links between specific shapes and DOSDP yaml
#245 opened Nov 3, 2020 by cmungall
@balhoff
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