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Link atlas with hic #1044

Link atlas with hic

Link atlas with hic #1044

Triggered via push August 5, 2024 17:32
Status Failure
Total duration 6m 35s
Artifacts

build.yml

on: push
Matrix: ci
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14 errors and 100 warnings
ci (Debug, linux gnu-12)
Error building package
ci (Release, linux gnu-12)
Error building package
ci (Debug, linux gnu-10)
Error building package
ci (Debug, linux clang-12)
Error building package
ci (Release, linux clang-12)
Error building package
ci (Debug, linux gnu-7)
Error building package
ci (Release, linux gnu-10)
Error building package
ci (Release, linux gnu-7)
Error building package
ci (Release, linux intel-classic)
Error building package
ci (Debug, linux intel-classic)
Error building package
ci (Debug, macos)
Error building package
ci (Release, linux intel)
Error building package
ci (Debug, linux intel)
Error building package
ci (Release, macos)
Error building package
ci (Debug, linux gnu-12)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Debug, linux gnu-12)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Debug, linux gnu-12)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, linux gnu-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-12)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-12)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Release, linux gnu-12)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Release, linux gnu-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-12)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-12)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, linux gnu-10)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Debug, linux gnu-10)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Debug, linux gnu-10)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-10)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-10)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-10)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, linux clang-12)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Debug, linux clang-12)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Debug, linux clang-12)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, linux clang-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux clang-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux clang-12)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux clang-12)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Release, linux clang-12)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Release, linux clang-12)
The process '/usr/bin/env' failed with exit code 1
ci (Release, linux clang-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux clang-12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux clang-12)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-7)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Debug, linux gnu-7)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Debug, linux gnu-7)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-7)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-7)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux gnu-7)
The process '/usr/bin/env' failed with exit code 1
ci (Release, linux gnu-10)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Release, linux gnu-10)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Release, linux gnu-10)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-10)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-10)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-10)
The process '/usr/bin/env' failed with exit code 1
ci (Release, linux gnu-7)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Release, linux gnu-7)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Release, linux gnu-7)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-7)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-7)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux gnu-7)
The process '/usr/bin/env' failed with exit code 1
ci (Release, linux intel-classic)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Release, linux intel-classic)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Release, linux intel-classic)
The process '/usr/bin/env' failed with exit code 1
ci (Release, linux intel-classic)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux intel-classic)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux intel-classic)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux intel-classic)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Debug, linux intel-classic)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Debug, linux intel-classic)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, linux intel-classic)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux intel-classic)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux intel-classic)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, macos)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Debug, macos)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Debug, macos)
rustup is outdated! To avoid broken installations, as soon as possible please run: brew upgrade Or, if you're OK with a less reliable fix: brew upgrade rustup
ci (Debug, macos)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, macos)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, macos)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Debug, macos)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, macos)
lz4 1.9.4 is already installed and up-to-date. To reinstall 1.9.4, run: brew reinstall lz4
ci (Debug, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Debug, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Debug, macos)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (Debug, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Debug, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Release, linux intel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Release, linux intel)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Release, linux intel)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux intel)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux intel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, linux intel)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, linux intel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Debug, linux intel)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Debug, linux intel)
The process '/usr/bin/env' failed with exit code 1
ci (Debug, linux intel)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux intel)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Debug, linux intel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, macos)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, pat-s/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ci (Release, macos)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, pat-s/[email protected], ecmwf-actions/build-package@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ci (Release, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Release, macos)
rustup is outdated! To avoid broken installations, as soon as possible please run: brew upgrade Or, if you're OK with a less reliable fix: brew upgrade rustup
ci (Release, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Release, macos)
The process '/usr/bin/env' failed with exit code 1
ci (Release, macos)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, macos)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, macos)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
ci (Release, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Release, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Release, macos)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (Release, macos)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ci (Release, macos)
lz4 1.9.4 is already installed and up-to-date. To reinstall 1.9.4, run: brew reinstall lz4