handle epoch time in _filter_to_restriction #612
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| name: Development | |
| on: | |
| pull_request: | |
| push: | |
| jobs: | |
| test-changelog: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Get changelog entry | |
| id: changelog_reader | |
| uses: guzman-raphael/changelog-reader-action@v5 | |
| with: | |
| path: ./CHANGELOG.md | |
| - name: Verify changelog parsing | |
| env: | |
| TAG_NAME: ${{steps.changelog_reader.outputs.version}} | |
| RELEASE_NAME: Release ${{steps.changelog_reader.outputs.version}} | |
| BODY: ${{steps.changelog_reader.outputs.changes}} | |
| PRERELEASE: ${{steps.changelog_reader.outputs.status == 'prereleased'}} | |
| DRAFT: ${{steps.changelog_reader.outputs.status == 'unreleased'}} | |
| run: | | |
| echo "TAG_NAME=${TAG_NAME}" | |
| echo "RELEASE_NAME=${RELEASE_NAME}" | |
| echo "BODY=${BODY}" | |
| echo "PRERELEASE=${PRERELEASE}" | |
| echo "DRAFT=${DRAFT}" | |
| build: | |
| needs: test-changelog | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| include: | |
| - py_ver: 3.8 | |
| distro: alpine | |
| image: djbase | |
| - py_ver: 3.9 | |
| distro: alpine | |
| image: djbase | |
| env: | |
| PY_VER: ${{matrix.py_ver}} | |
| DISTRO: ${{matrix.distro}} | |
| IMAGE: ${{matrix.image}} | |
| DOCKER_CLIENT_TIMEOUT: "120" | |
| COMPOSE_HTTP_TIMEOUT: "120" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Compile image | |
| run: | | |
| export PHARUS_VERSION=$(cat pharus/version.py | grep -oP '\d+\.\d+\.\d+') | |
| export HOST_UID=$(id -u) | |
| docker compose -f docker-compose-build.yaml up --exit-code-from pharus --build | |
| IMAGE=$(docker images --filter "reference=datajoint/pharus*" \ | |
| --format "{{.Repository}}") | |
| TAG=$(docker images --filter "reference=datajoint/pharus*" --format "{{.Tag}}") | |
| docker save "${IMAGE}:${TAG}" | \ | |
| gzip > "image-pharus-${PHARUS_VERSION}-py${PY_VER}-${DISTRO}.tar.gz" | |
| echo "PHARUS_VERSION=${PHARUS_VERSION}" >> $GITHUB_ENV | |
| - name: Add image artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: image-pharus-${{env.PHARUS_VERSION}}-py${{matrix.py_ver}}-${{matrix.distro}} | |
| path: "image-pharus-${{env.PHARUS_VERSION}}-py${{matrix.py_ver}}-\ | |
| ${{matrix.distro}}.tar.gz" | |
| retention-days: 1 | |
| - name: Add pip artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: pip-pharus-${{env.PHARUS_VERSION}}-py${{matrix.py_ver}} | |
| path: dist | |
| retention-days: 1 | |
| test: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| include: | |
| - py_ver: 3.8 | |
| distro: alpine | |
| image: djbase | |
| - py_ver: 3.9 | |
| distro: alpine | |
| image: djbase | |
| env: | |
| PY_VER: ${{matrix.py_ver}} | |
| DISTRO: ${{matrix.distro}} | |
| IMAGE: ${{matrix.image}} | |
| DOCKER_CLIENT_TIMEOUT: "120" | |
| COMPOSE_HTTP_TIMEOUT: "120" | |
| AS_SCRIPT: "TRUE" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Determine package version | |
| run: | | |
| PHARUS_VERSION=$(cat pharus/version.py | grep -oP '\d+\.\d+\.\d+') | |
| echo "PHARUS_VERSION=${PHARUS_VERSION}" >> $GITHUB_ENV | |
| - name: Fetch image artifact | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: image-pharus-${{env.PHARUS_VERSION}}-py${{matrix.py_ver}}-${{matrix.distro}} | |
| - name: Run primary tests | |
| run: | | |
| export HOST_UID=$(id -u) | |
| docker load < "image-pharus-${PHARUS_VERSION}-py${PY_VER}-${DISTRO}.tar.gz" | |
| docker compose -f docker-compose-test.yaml up --exit-code-from pharus | |
| publish-release: | |
| if: | | |
| github.event_name == 'push' && | |
| startsWith(github.ref, 'refs/tags') && | |
| ( | |
| github.repository_owner == 'datajoint' || | |
| github.repository_owner == 'datajoint-company' || | |
| github.repository_owner == 'dj-sciops' | |
| ) | |
| needs: test | |
| runs-on: ubuntu-latest | |
| env: | |
| TWINE_USERNAME: ${{secrets.twine_username}} | |
| TWINE_PASSWORD: ${{secrets.twine_password}} | |
| outputs: | |
| release_upload_url: ${{steps.create_gh_release.outputs.upload_url}} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Determine package version | |
| run: | | |
| PHARUS_VERSION=$(cat pharus/version.py | grep -oP '\d+\.\d+\.\d+') | |
| echo "PHARUS_VERSION=${PHARUS_VERSION}" >> $GITHUB_ENV | |
| - name: Get changelog entry | |
| id: changelog_reader | |
| uses: guzman-raphael/changelog-reader-action@v5 | |
| with: | |
| path: ./CHANGELOG.md | |
| version: ${{env.PHARUS_VERSION}} | |
| - name: Create GH release | |
| id: create_gh_release | |
| uses: actions/create-release@v1 | |
| env: | |
| GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} | |
| with: | |
| tag_name: ${{steps.changelog_reader.outputs.version}} | |
| release_name: Release ${{steps.changelog_reader.outputs.version}} | |
| body: ${{steps.changelog_reader.outputs.changes}} | |
| prerelease: ${{steps.changelog_reader.outputs.status == 'prereleased'}} | |
| draft: ${{steps.changelog_reader.outputs.status == 'unreleased'}} | |
| - name: Fetch image artifact | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: image-pharus-${{env.PHARUS_VERSION}}-py3.8-alpine | |
| - name: Fetch 3.8 pip artifacts | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: pip-pharus-${{env.PHARUS_VERSION}}-py3.8 | |
| path: dist | |
| - name: Fetch 3.9 pip artifacts | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: pip-pharus-${{env.PHARUS_VERSION}}-py3.8 | |
| path: dist | |
| - name: Publish pip release | |
| run: | | |
| export HOST_UID=$(id -u) | |
| docker load < "image-pharus-${PHARUS_VERSION}-py3.8-alpine.tar.gz" | |
| docker compose -f docker-compose-build.yaml run \ | |
| -e TWINE_USERNAME=${TWINE_USERNAME} -e TWINE_PASSWORD=${TWINE_PASSWORD} pharus \ | |
| sh -lc "pip install twine && python -m twine upload dist/*" | |
| - name: Determine pip artifact paths | |
| run: | | |
| echo "PHARUS_WHEEL_PATH=$(ls dist/pharus-*.whl)" >> $GITHUB_ENV | |
| echo "PHARUS_SDIST_PATH=$(ls dist/pharus-*.tar.gz)" >> $GITHUB_ENV | |
| - name: Upload 3.8 pip wheel asset to release | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} | |
| with: | |
| upload_url: ${{steps.create_gh_release.outputs.upload_url}} | |
| asset_path: ${{env.PHARUS_WHEEL_PATH}} | |
| asset_name: pip-pharus-${{env.PHARUS_VERSION}}-py3.8.whl | |
| asset_content_type: application/zip | |
| - name: Upload 3.9 pip wheel asset to release | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} | |
| with: | |
| upload_url: ${{steps.create_gh_release.outputs.upload_url}} | |
| asset_path: ${{env.PHARUS_WHEEL_PATH}} | |
| asset_name: pip-pharus-${{env.PHARUS_VERSION}}-py3.9.whl | |
| asset_content_type: application/zip | |
| - name: Upload 3.8 pip sdist asset to release | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} | |
| with: | |
| upload_url: ${{steps.create_gh_release.outputs.upload_url}} | |
| asset_path: ${{env.PHARUS_SDIST_PATH}} | |
| asset_name: pip-pharus-${{env.PHARUS_VERSION}}-py3.8.tar.gz | |
| asset_content_type: application/gzip | |
| - name: Upload 3.9 pip sdist asset to release | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} | |
| with: | |
| upload_url: ${{steps.create_gh_release.outputs.upload_url}} | |
| asset_path: ${{env.PHARUS_SDIST_PATH}} | |
| asset_name: pip-pharus-${{env.PHARUS_VERSION}}-py3.9.tar.gz | |
| asset_content_type: application/gzip | |
| - name: Upload deploy docker environment | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} | |
| with: | |
| upload_url: ${{steps.create_gh_release.outputs.upload_url}} | |
| asset_path: docker-compose-deploy.yaml | |
| asset_name: docker-compose-deploy.yaml | |
| asset_content_type: application/yaml | |
| publish-images: | |
| if: | | |
| github.event_name == 'push' && | |
| startsWith(github.ref, 'refs/tags') && | |
| ( | |
| github.repository_owner == 'datajoint' || | |
| github.repository_owner == 'datajoint-company' || | |
| github.repository_owner == 'dj-sciops' | |
| ) | |
| needs: publish-release | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| include: | |
| - py_ver: 3.8 | |
| distro: alpine | |
| image: djbase | |
| - py_ver: 3.9 | |
| distro: alpine | |
| image: djbase | |
| env: | |
| PY_VER: ${{matrix.py_ver}} | |
| DISTRO: ${{matrix.distro}} | |
| IMAGE: ${{matrix.image}} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Determine package version | |
| run: | | |
| PHARUS_VERSION=$(cat pharus/version.py | grep -oP '\d+\.\d+\.\d+') | |
| echo "PHARUS_VERSION=${PHARUS_VERSION}" >> $GITHUB_ENV | |
| - name: Fetch image artifact | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: image-pharus-${{env.PHARUS_VERSION}}-py${{matrix.py_ver}}-${{matrix.distro}} | |
| - name: Login to DockerHub | |
| uses: docker/login-action@v1 | |
| with: | |
| username: ${{secrets.docker_username}} | |
| password: ${{secrets.docker_password}} | |
| - name: Publish image | |
| run: | | |
| docker load < "image-pharus-${PHARUS_VERSION}-py${PY_VER}-${DISTRO}.tar.gz" | |
| IMAGE=$(docker images --filter "reference=datajoint/*" --format "{{.Repository}}") | |
| TAG=$(docker images --filter "reference=datajoint/*" --format "{{.Tag}}") | |
| docker tag "${IMAGE}:${TAG}" "${IMAGE}:${TAG}-py${PY_VER}" | |
| docker push "${IMAGE}:${TAG}-py${PY_VER}" | |
| docker tag "${IMAGE}:${TAG}" "${IMAGE}:${TAG}-py${PY_VER}-${GITHUB_SHA:0:7}" | |
| docker push "${IMAGE}:${TAG}-py${PY_VER}-${GITHUB_SHA:0:7}" | |
| [ "$PY_VER" == "3.9" ] && [ "$DISTRO" == "alpine" ] \ | |
| && docker push "${IMAGE}:${TAG}" \ | |
| && docker tag "${IMAGE}:${TAG}" "${IMAGE}:latest" \ | |
| && docker push "${IMAGE}:latest" \ | |
| || echo "skipping 'latest' tag..." | |
| - name: Upload image to release | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} | |
| with: | |
| upload_url: ${{needs.publish-release.outputs.release_upload_url}} | |
| asset_path: "image-pharus-${{env.PHARUS_VERSION}}-py${{matrix.py_ver}}-\ | |
| ${{matrix.distro}}.tar.gz" | |
| asset_name: "image-pharus-${{env.PHARUS_VERSION}}-py${{matrix.py_ver}}-\ | |
| ${{matrix.distro}}.tar.gz" | |
| asset_content_type: application/gzip | |
| publish-docs: | |
| if: | | |
| github.event_name == 'push' && | |
| startsWith(github.ref, 'refs/tags') && | |
| ( | |
| github.repository_owner == 'datajoint' || | |
| github.repository_owner == 'datajoint-company' || | |
| github.repository_owner == 'dj-sciops' | |
| ) | |
| needs: publish-release | |
| uses: datajoint/.github/.github/workflows/mkdocs_release.yaml@main | |
| permissions: | |
| contents: write |