Use mzdata::mz_read, adding support for gzipped MGF and mzML, and for Thermo raw and mzMLb
#22
paretjetest.yml
on: pull_request
clippy_check
41s
Matrix: pytest
Annotations
15 errors and 6 warnings
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::CentroidPeak: mzdata::prelude::IndexedCoordinate<mzpeaks::coordinate::dim::MZ>` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::CentroidPeak: mzdata::prelude::IntensityMeasurement` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::DeconvolutedPeak: mzdata::prelude::IndexedCoordinate<mzpeaks::coordinate::dim::Mass>` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::DeconvolutedPeak: mzdata::prelude::IntensityMeasurement` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::DeconvolutedPeak: mzdata::prelude::KnownCharge` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::CentroidPeak: std::convert::From<mzpeaks::peak::CentroidPeak>` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::DeconvolutedPeak: std::convert::From<mzpeaks::peak::DeconvolutedPeak>` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the function or associated item `new` exists for struct `MGFReaderType<_, CentroidPeak, DeconvolutedPeak>`, but its trait bounds were not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::CentroidPeak: mzdata::prelude::IndexedCoordinate<mzpeaks::coordinate::dim::MZ>` is not satisfied
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clippy_check:
src/parse_mzdata.rs#L52
the trait bound `mzpeaks::CentroidPeak: mzdata::prelude::IntensityMeasurement` is not satisfied
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pytest (macos-latest)
Process completed with exit code 1.
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pytest (windows-latest)
The job was canceled because "macos-latest" failed.
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pytest (windows-latest)
The operation was canceled.
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pytest (ubuntu-latest)
The job was canceled because "macos-latest" failed.
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pytest (ubuntu-latest)
The operation was canceled.
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clippy_check
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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clippy_check
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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