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remove max chunk size constant #376

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merged 1 commit into from
Jul 25, 2024
Merged

remove max chunk size constant #376

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3 changes: 1 addition & 2 deletions lib/idseq_utils/idseq_utils/batch_run_helpers.py
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Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,6 @@
)
log = logging.getLogger(__name__)

MAX_CHUNKS_IN_FLIGHT = 30 # TODO: remove this constant, currently does nothing since we have at most 30 index chunks

# mitigation for TooManyRequestExceptions
config = Config(
Expand Down Expand Up @@ -322,7 +321,7 @@ def run_alignment(
]
for chunk_id, db_chunk in enumerate(_db_chunks(db_bucket, db_prefix))
)
with Pool(MAX_CHUNKS_IN_FLIGHT) as p:
with Pool(len(chunks)) as p:
p.starmap(_run_chunk, chunks)
run(["s3parcp", "--recursive", chunk_dir, "chunks"], check=True)
if os.path.exists(os.path.join("chunks", "cache")):
Expand Down
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