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update conversion notes
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h-mayorquin committed Nov 6, 2024
1 parent 8f5c887 commit 6f49b76
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7 changes: 6 additions & 1 deletion src/kim_lab_to_nwb/conversion_notes.md
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# data(5,:) is y-position of the visual pattern
# data(6,:) is 2-photon frame synchronization signal (1 pulse corresponds to 1 frame)
# data(7,:) is behavior camera signal (1 pulse corresponds to 1 frame)
# data(8,:) indicates the start of a stimulus (it is empty in this example)
# data(8,:) indicates the start of a stimulus (it is empty in this example)

# Questions for the meeting on 2024-11-06
* The data that you shared with us? is this associated with a paper? is this something you are interested on sharing on dandi? What are the expectations of the code
* The tiff format, what kind of microscope is it? Scanimage? If you could send me the model that would be useful.
* How is the stimuli presented? That is, I have two images, are they presented on time?`
2 changes: 1 addition & 1 deletion src/kim_lab_to_nwb/kim_conversion.py
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Expand Up @@ -176,7 +176,7 @@ def convert_session_to_nwb(
if __name__ == "__main__":
# Example usage with the original paths
data_folder_path = Path("/Users/heberto/project_data/Sample data-selected/Kim Lab")

data_folder_path = Path("/home/heberto/cohen_project/Sample data/Kim Lab")
# Define input paths
matlab_data_file_path = data_folder_path / "raw data" / "data_20240108b_00003.mat"
video_file_path = data_folder_path / "raw data" / "20240108b_00003.avi"
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