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campanam committed Jul 9, 2024
1 parent da9d840 commit 588cf84
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3 changes: 3 additions & 0 deletions CHANGELOG.Md
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Expand Up @@ -315,6 +315,9 @@ Improved sanity checks
Script to correct vcftools site overflow glitch using bcftools stats

## nextflow.config
### Version 1.2.2
Updated R channel to conda-forge

### Version 1.2.0
Removal of redundant dnm_bootstraps parameter
Update conda dependencies for generateSummaryStatsm, calcDNMRate, summarizeDNM
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4 changes: 2 additions & 2 deletions nextflow.config
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/* RatesTools version 1.2.0
/* RatesTools version 1.2.2
Michael G. Campana and Ellie E. Armstrong, 2020-2024
Smithsonian Institution and Stanford University
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conda = 'bioconda::bcftools=1.18 conda-forge::gsl=2.7 conda-forge::libzlib=1.2.13'
}
withName: plotDPGQ {
conda = 'r::r-tidyverse=1.3.1 r::r-data.table=1.14.2'
conda = 'conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.2'
}
withName: splitVCFs {
conda = 'conda-forge::ruby=3.2.2 bioconda::htslib=1.18 conda-forge::libzlib=1.2.13'
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2 changes: 1 addition & 1 deletion ratestools.nf
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#!/usr/bin/env nextflow

/* RatesTools version 1.2.1
/* RatesTools version 1.2.2
Michael G. Campana and Ellie E. Armstrong, 2020-2024
Smithsonian Institution and Stanford University
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