Deep Mendelian Randomization: Investigating the Causal Knowledge of Genomic Deep Learning Models

This repository contains the the source code used to generate the data and figures in the Deep MR paper. For detailed instructions on how to reproduce the experiments described in the paper, see REPRODUCIBILITY.

For citing in academic work, please use:

@article{malina2022deep,
  title={Deep Mendelian Randomization: Investigating the Causal Knowledge of Genomic Deep Learning Models},
  author={Malina, Stephen and Cizin, Daniel and Knowles, David A},
  journal={bioRxiv},
  year={2022},
  publisher={Cold Spring Harbor Laboratory}
}