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41 followers · 43 following

Achievements

Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Organizations

@Reproducibility-FBB-MSU @open2c

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  1. open2c/pairtools open2c/pairtools Public

    Extract 3D contacts (.pairs) from sequencing alignments

    Python 104 32

  2. open2c/open2c_examples open2c/open2c_examples Public

    Jupyter Notebook 17 9

  3. open2c/cooltools open2c/cooltools Public

    The tools for your .cool's

    Jupyter Notebook 140 51

  4. RedClib RedClib Public

    Red-C data processing

    Nextflow 13 2

  5. fontanka fontanka Public

    Fontanka is a set of tools to work with fountains in Hi-C data. It aims to provide a flexible Python API and specialized CLI for calling fountains from cool Hi-C files.

    Python 7

  6. guma44/GEOparse guma44/GEOparse Public

    Python library to access Gene Expression Omnibus Database (GEO)

    Jupyter Notebook 143 52