[DOC] Preprocessing notebook (#2345) #6401
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| name: PR pytest | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| paths: | |
| - "aeon/**" | |
| - ".github/workflows/**" | |
| - "pyproject.toml" | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.head_ref || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test-no-soft-deps: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - if: ${{ github.event_name == 'pull_request' && !contains(github.event.pull_request.labels.*.name, 'no numba cache') }} | |
| name: Restore numba cache | |
| uses: ./.github/actions/numba_cache | |
| with: | |
| cache_name: "test-no-soft-deps" | |
| runner_os: ${{ runner.os }} | |
| python_version: "3.10" | |
| - name: Install aeon and dependencies | |
| uses: nick-fields/retry@v3 | |
| with: | |
| timeout_minutes: 30 | |
| max_attempts: 3 | |
| command: python -m pip install .[dev] | |
| - name: Show dependencies | |
| run: python -m pip list | |
| - name: Run tests | |
| run: python -m pytest -n logical -k 'not TestAll' | |
| pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ ubuntu-22.04, macOS-14, windows-2022 ] | |
| python-version: [ "3.9", "3.10", "3.11", "3.12" ] | |
| # skip python versions unless the PR has the 'full pytest actions' label | |
| pr-testing: | |
| - ${{ (github.event_name != 'pull_request' || !contains(github.event.pull_request.labels.*.name, 'full pytest actions')) }} | |
| exclude: | |
| - pr-testing: true | |
| python-version: "3.10" | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - if: ${{ github.event_name == 'pull_request' && !contains(github.event.pull_request.labels.*.name, 'no numba cache') }} | |
| name: Restore numba cache | |
| uses: ./.github/actions/numba_cache | |
| with: | |
| cache_name: "pytest" | |
| runner_os: ${{ runner.os }} | |
| python_version: ${{ matrix.python-version }} | |
| - name: Install aeon and dependencies | |
| uses: nick-fields/retry@v3 | |
| with: | |
| timeout_minutes: 30 | |
| max_attempts: 3 | |
| command: python -m pip install .[all_extras,dev] | |
| - name: Show dependencies | |
| run: python -m pip list | |
| - name: Run tests | |
| # run the full test suit if a PR has the 'full pytest actions' label | |
| run: python -m pytest -n logical --prtesting ${{ github.event_name != 'pull_request' || !contains(github.event.pull_request.labels.*.name, 'full pytest actions') }} | |
| codecov: | |
| # run the code coverage job if a PR has the 'codecov actions' label | |
| if: ${{ github.event_name == 'pull_request' && contains(github.event.pull_request.labels.*.name, 'codecov actions') }} | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Disable Numba JIT | |
| run: echo "NUMBA_DISABLE_JIT=1" >> $GITHUB_ENV | |
| - name: Install aeon and dependencies | |
| uses: nick-fields/retry@v3 | |
| with: | |
| timeout_minutes: 30 | |
| max_attempts: 3 | |
| command: python -m pip install .[all_extras,unstable_extras,dev] | |
| - name: Show dependencies | |
| run: python -m pip list | |
| - name: Run tests | |
| run: python -m pytest -n logical --cov=aeon --cov-report=xml --timeout 1800 | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |