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00Birds_trinity_and_blast_loop2.sh
00Birds_trinity_and_blast_loop2.sh
 
 
Genome Wide Association analysis (GWAS) — angus 6.0 documentation.pdf
Genome Wide Association analysis (GWAS) — angus 6.0 documentation.pdf
 
 
Genome_Assembly_Final_Pipeline_and_Results.pdf
Genome_Assembly_Final_Pipeline_and_Results.pdf
 
 
Megan6
Megan6
 
 
Next Generation Sequencing spreadsheet - T.tsv
Next Generation Sequencing spreadsheet - T.tsv
 
 
README.md
README.md
 
 
Ssuis.md
Ssuis.md
 
 
Variant calling pipeline for a mammalian genome — angus 6.0 documentation.pdf
Variant calling pipeline for a mammalian genome — angus 6.0 documentation.pdf
 
 
Virome_Turnstones.html
Virome_Turnstones.html
 
 
bioinformatics-one-liners.md
bioinformatics-one-liners.md
 
 
blast_wrapper.sh
blast_wrapper.sh
 
 
deeplearningbook.pdf
deeplearningbook.pdf
 
 
heca
heca
 
 
important_links
important_links
 
 
makePBS.py
makePBS.py
 
 
mapping_statistics.sh
mapping_statistics.sh
 
 
orientRNAs.pl
orientRNAs.pl
 
 
synonymy.pl
synonymy.pl
 
 
trinity_workshop_part1.pdf
trinity_workshop_part1.pdf
 
 
virodio.sh
virodio.sh
 
 
virome_fish
virome_fish
 
 
vk_16S-analysis_dada2.md
vk_16S-analysis_dada2.md
 
 
vk_ReadStats.sh
vk_ReadStats.sh
 
 
vk_combine_CSVs.py
vk_combine_CSVs.py
 
 
vk_dada2_tutorial.R
vk_dada2_tutorial.R
 
 
vk_download_sequences_from_ncbi.sh
vk_download_sequences_from_ncbi.sh
 
 
vk_edit_astro_tree.R
vk_edit_astro_tree.R
 
 
vk_install_run_provean_notes.md
vk_install_run_provean_notes.md
 
 
vk_maker_genome_annotation.md
vk_maker_genome_annotation.md
 
 
vk_merge_table.py
vk_merge_table.py
 
 
vk_metagenomics_pipeline.txt
vk_metagenomics_pipeline.txt
 
 
vk_nanopore_assembly.sh
vk_nanopore_assembly.sh
 
 
vk_phylogenies.pl
vk_phylogenies.pl
 
 
vk_refBasedAssembly_pilon.sh
vk_refBasedAssembly_pilon.sh
 
 
vk_reference_based_assembly.sh
vk_reference_based_assembly.sh
 
 
vk_runTaxonomizedBLAST.pl
vk_runTaxonomizedBLAST.pl
 
 
vk_taxid_dist.pl
vk_taxid_dist.pl
 
 
vk_useful_ngs_oneliners
vk_useful_ngs_oneliners
 
 
vk_variant_effect_analysis.md
vk_variant_effect_analysis.md
 
 
vk_virus_discovery_pipeline.sh
vk_virus_discovery_pipeline.sh
 
 

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Metagenomics

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