NAMESPACE

# Generated by roxygen2: do not edit by hand

export(filter_LD)
export(get_LD)
export(get_LD_blocks)
export(get_LD_matrix)
export(get_LD_vcf)
export(get_MAF_UKB)
export(get_lead_r2)
export(plot_LD)
export(r2_to_r)
export(readSparse)
export(saveSparse)
export(select_vcf_samples)
export(subset_common_snps)
export(to_sparse)
export(vcf_to_plink)
importFrom(Matrix,forceSymmetric)
importFrom(Matrix,readMM)
importFrom(VariantAnnotation,genotypeToSnpMatrix)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(data.table,fread)
importFrom(data.table,merge.data.table)
importFrom(downloadR,downloader)
importFrom(downloadR,load_rdata)
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,rename)
importFrom(dplyr,slice)
importFrom(echoconda,find_executables_remote)
importFrom(echodata,mungesumstats_to_echolocatoR)
importFrom(echotabix,liftover)
importFrom(echotabix,query)
importFrom(echotabix,query_vcf)
importFrom(methods,as)
importFrom(methods,is)
importFrom(reticulate,import)
importFrom(reticulate,source_python)
importFrom(reticulate,use_condaenv)
importFrom(snpStats,col.summary)
importFrom(snpStats,ld)
importFrom(snpStats,read.plink)
importFrom(stats,heatmap)
importFrom(tools,R_user_dir)
importFrom(utils,capture.output)