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{WIP} LPJ-GUESS SDA Couplers #2660

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{WIP} LPJ-GUESS SDA Couplers #2660

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Commits on Jun 8, 2019

  1. started new read state function

    @istfer
    istfer committed Jun 8, 2019
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  2. add helper function that locates function

    @istfer
    istfer committed Jun 8, 2019
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  3. add helper function that finds closing paranthesis

    @istfer
    istfer committed Jun 8, 2019
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Commits on Jun 10, 2019

  1. add function that finds stream

    @istfer
    istfer committed Jun 10, 2019
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Commits on Jun 13, 2019

  1. start reading

    @istfer
    istfer committed Jun 13, 2019
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  2. first read

    @istfer
    istfer committed Jun 13, 2019
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  3. extract typedef enums

    @istfer
    istfer committed Jun 13, 2019
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  4. read typedef enum

    @istfer
    istfer committed Jun 13, 2019
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  5. read Historic

    @istfer
    istfer committed Jun 13, 2019
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  6. read vector

    @istfer
    istfer committed Jun 13, 2019
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Commits on Jun 14, 2019

  1. read vector with const int

    @istfer
    istfer committed Jun 14, 2019
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  2. read in parameters header too

    @istfer
    istfer committed Jun 14, 2019
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  3. case fo seed

    @istfer
    istfer committed Jun 14, 2019
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Commits on Jun 15, 2019

  1. ready to loop over stands

    @istfer
    istfer committed Jun 15, 2019
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  2. start looping over patches

    @istfer
    istfer committed Jun 15, 2019
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  3. reading individual class

    @istfer
    istfer committed Jun 15, 2019
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Commits on Jun 16, 2019

  1. first pass at read individual

    @istfer
    istfer committed Jun 16, 2019
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Commits on Jun 17, 2019

  1. finish individual

    @istfer
    istfer committed Jun 17, 2019
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  2. few more flexibility

    @istfer
    istfer committed Jun 17, 2019
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  3. read matrix

    @istfer
    istfer committed Jun 17, 2019
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  4. getting ready to read sompool

    @istfer
    istfer committed Jun 17, 2019
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Commits on Jun 18, 2019

  1. catch one more case

    @istfer
    istfer committed Jun 18, 2019
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  2. finished soil

    @istfer
    istfer committed Jun 18, 2019
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  3. adding more hardcoded constants for now

    @istfer
    istfer committed Jun 18, 2019
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  4. getting ready to read fluxes

    @istfer
    istfer committed Jun 18, 2019
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  5. finished patch

    @istfer
    istfer committed Jun 18, 2019
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  6. finished reading all - first pass

    @istfer
    istfer committed Jun 18, 2019
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  7. Added allometry and allocation functions from LPJ-GUESS. Also summing… 

    … variables to a per-gridcells basis, and first start on updating the state.
    @MagicForrest
    MagicForrest committed Jun 18, 2019
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Commits on Jun 19, 2019

  1. read meta.bin

    @istfer
    istfer committed Jun 19, 2019
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  2. allocation() function now correctly included

    @MagicForrest
    MagicForrest committed Jun 19, 2019
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  3. k_latosa is sapwood_ratio in pecan

    @istfer
    istfer committed Jun 19, 2019
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  4. Merge branch 'develop' of github.com:PecanProject/pecan into LPJGUESS… 

    …_SDA
    @istfer
    istfer committed Jun 19, 2019
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  5. small rearrangement for compilation

    @istfer
    istfer committed Jun 19, 2019
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  6. add new par minmoist_est

    @istfer
    istfer committed Jun 19, 2019
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  7. Allocation of biomass now also works. It seems to fail when scaling b… 

    …iomass down ~0.55 or less. cmass_debt is not included in the calculation and scaled like the other pools.
    @MagicForrest
    MagicForrest committed Jun 19, 2019
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Commits on Jun 20, 2019

  1. using phenology and leafphysiognomy

    @istfer
    istfer committed Jun 20, 2019
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  2. Added allometry() call. Gives the target results for a biomass change… 

    … doen to about 0.7. Also updated the way of tracking individuals to better facilitate looping.
    @MagicForrest
    MagicForrest committed Jun 20, 2019
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  3. Factorised the adjustDensity and adjustBiomass code.

    @MagicForrest
    MagicForrest committed Jun 20, 2019
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Commits on Jun 21, 2019

  1. few modifications for PalEON model version

    @istfer
    istfer committed Jun 21, 2019
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  2. parsing files some more

    @istfer
    istfer committed Jun 21, 2019
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  3. Also scale and adjust N pools.

    @MagicForrest
    MagicForrest committed Jun 21, 2019
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  4. Mostly code tidying/documentation ahead of merging.

    @MagicForrest
    MagicForrest committed Jun 21, 2019
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  5. Merge branch 'LPJGUESS_SDA' into LPJGUESS_SDA

    @istfer
    istfer authored Jun 21, 2019
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  6. Merge pull request #2 from MagicForrest/LPJGUESS_SDA 

    First merge of LPJ-GUESS state updating code
    @istfer
    istfer authored Jun 21, 2019
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  7. modifying function for PalEON version

    @istfer
    istfer committed Jun 21, 2019
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  8. Merge branch 'LPJGUESS_SDA' of https://github.com/istfer/pecan into L… 

    …PJGUESS_SDA
    @istfer
    istfer committed Jun 21, 2019
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Commits on Jun 22, 2019

  1. read new PhotosynthesisResults

    @istfer
    istfer committed Jun 22, 2019
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Commits on Jun 24, 2019

  1. updates for the new model version, first pass finished

    @istfer
    istfer committed Jun 24, 2019
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  2. Documented adjustBiomass() and cleaned the fucntion a little.

    @MagicForrest
    MagicForrest committed Jun 24, 2019
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  3. start read_restart.LPJGUESS

    @istfer
    istfer committed Jun 24, 2019
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  4. LPJGUESS uses exact days and will require split inputs function

    @istfer
    istfer committed Jun 24, 2019
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  5. backbone of read_restart

    @istfer
    istfer committed Jun 24, 2019
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  6. Added HEIGHT_MAX as an argument to over-ride the LPJ-GUESS 150m max h… 

    …eight.
    @MagicForrest
    MagicForrest committed Jun 24, 2019
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  7. Merge branch 'LPJGUESS_SDA' of github.com:MagicForrest/pecan into LPJ… 

    …GUESS_SDA
    @MagicForrest
    MagicForrest committed Jun 24, 2019
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Commits on Jun 25, 2019

  1. start split inputs for LPJGUESS

    @istfer
    istfer committed Jun 25, 2019
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Commits on Jun 26, 2019

  1. number of individuals are back

    @istfer
    istfer committed Jun 26, 2019
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Commits on Jun 27, 2019

  1. Just coding style

    @MagicForrest
    MagicForrest committed Jun 27, 2019
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  2. Merge branch 'LPJGUESS_SDA' into LPJGUESS_SDA

    @istfer
    istfer authored Jun 27, 2019
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  3. Merge pull request #3 from MagicForrest/LPJGUESS_SDA 

    merge hackathon pr
    @istfer
    istfer authored Jun 27, 2019
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  4. define state year

    @istfer
    istfer committed Jun 27, 2019
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  5. Merge branch 'LPJGUESS_SDA' of https://github.com/istfer/pecan into L… 

    …PJGUESS_SDA
    @istfer
    istfer committed Jun 27, 2019
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Commits on Jun 28, 2019

  1. add doc tags

    @istfer
    istfer committed Jun 28, 2019
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  2. LPJGUESS package build

    @istfer
    istfer committed Jun 28, 2019
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  3. no need for single quote

    @istfer
    istfer committed Jun 28, 2019
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  4. Merge branch 'develop' of github.com:PecanProject/pecan into LPJGUESS… 

    …_SDA
    @istfer
    istfer committed Jun 28, 2019
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Commits on Jul 17, 2020

  1. Merge branch 'develop' of github.com:PecanProject/pecan into LPJGUESS… 

    …_SDA
    @istfer
    istfer committed Jul 17, 2020
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Commits on May 4, 2023

  1. Merge branch 'develop' into LPJGUESS_SDA

    @infotroph
    infotroph authored May 4, 2023
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Commits on Nov 8, 2024

  1. Merge branch 'develop' into LPJGUESS_SDA

    @mdietze
    mdietze authored Nov 8, 2024
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