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MicheleBortol authored Aug 20, 2024
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Expand Up @@ -110,13 +110,16 @@ The `Embeddings` file is necessary to show the cells in a scatterplot.
#### Custom config files
Custom config files should have a `.json` extension and added as attachements to a dataset or an image.
The configuration files does not need to refer to the dataset / image it is attached to and can refer to other images.
[examples](http://vitessce.io/examples/)

For how to create a custom config file see:
- [VItessce Docs](http://vitessce.io/docs/view-config-json/)
- [Vitessce Examples](http://vitessce.io/examples/)

#### Serving the images / data /metadata
Images and data can be served through:
- [omero-web-zarr](https://pypi.org/project/omero-web-zarr/): OME-NGFF images only.
- [omero-openlink](https://github.com/sukunis/OMERO.openlink): all images and file attachements.
- ´webclient/annotation/´ endpoint: only for Annotations (useful for file attachments).
- `webclient/annotation/` endpoint: only for Annotations (useful for file attachments).

Development
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