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PySRSequenceRegressor #677

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Commits on Jul 21, 2024

  1. Added recursive_history_length 

    honestly I think it works
it doesn't take an target array - only features :)
    @wenbang24
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  2. Changed minimum recursive history length 

    from 1 to 0
    @wenbang24
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  3. fixed syntax error

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  4. Added recurrence functionality

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  5. Removed a debug print, also formatted

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Commits on Jul 23, 2024

  1. new PySRSequenceRegressor class! 

    it inherits PySRRegressor and changes __init__ (new recursive_history_length hyperparameter) and run (preprocessing data so it works with everything else)
also got rid of stuff in PySRRegressor
also changed __init__.py to import new class
    @wenbang24
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  2. made recursive_history_length not optional

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  3. added tests for PySRSequenceRegressor 

    a lot copied from the PySRRegressor tests :)
    @wenbang24
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  5. changed __init__ of PySRSequenceRegressor to use PySRRegressor's __in… 

    …it__ function
    @wenbang24
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  6. fixed bug that removed first data point

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  7. added sequence to test names to make things a bit clearer

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  8. added .eggs to .gitignore

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  9. Merge branch 'recurrence' into wenbang24/issue94

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  10. Merge pull request #1 from wenbang24/wenbang24/issue94 

    oops wrong branch
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Commits on Jul 24, 2024

  1. updated docstring for PySRSequenceRegressor

    @wenbang24
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  3. updated fit() 

    now uses super().fit()
also got rid of Xresampled
    @wenbang24
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  4. multidimensionality!!! 

    note: flattens all of the arrays
    @wenbang24
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  5. fixed variable names for multidimensionality

    @wenbang24
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  6. fixed variable names

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  8. git is hard

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  9. added new preprocessing to predict

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  10. Merge branch 'recurrence' of github.com:wenbang24/PySR into recurrence 

    git is really hard
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Commits on Jul 25, 2024

  1. removed unecessary test

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  2. small documentaion change

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  3. didn't the last commit work?

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  4. another small doc change

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  5. ok the preprocessing ACTUALLY works now

    @wenbang24
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  6. fixed custom variable names

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  8. updated tests

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  10. all tests passing!!! 

    but if test_sequence_weighted_bumper just run it again and it should be fine :)
    @wenbang24
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  12. refactor: moved PySRSequenceRegressor to ssr.py

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Commits on Jul 28, 2024

  1. slight change in multidimensional data error test

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  2. made the type checking work, added tests for unused variables

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  4. yeah the override decorator wasn't needed

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  6. this test is too harsh

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  7. swap super.__init__ and other thing in __init__ 

    Co-authored-by: Miles Cranmer <[email protected]>
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  8. now needs numpy 1.20

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  9. changed predict docstring

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  10. change test sequence name

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  11. change multidimensional data error test

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Commits on Jul 29, 2024

  1. renamed ssr.py to regressor_sequence.py

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  2. moved assertions to new function, fixed error in variable name genera… 

    …tion
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  3. removed need for temp

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  5. changed variable names and made target generation a bit more efficient

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  6. made predict use _check_assertions as well

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  8. moved variable name generation to new function and also added variabl… 

    …e name tests
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  9. remove unnecessary test

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  11. made unused variables throw errors

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  13. changed check_assertions to have no return value

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  15. removed unecessary tests

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  16. changed up variable names

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  17. fixed up check_assertions in predict

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  18. fixed bug in variable name generation

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  19. fixed bug in assertion checking in predict

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  20. changed up variable names

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Commits on Jul 30, 2024

  1. changed name of variable name generator

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  2. changed variable name generator to take n_features

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  3. Updated docstring

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  4. added validation of X

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  5. added another validation

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  7. added doc string for PySRSymbolicRegressor

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  9. changed variable name generation function to isinstance rather than t… 

    …ruthy bcuz python gets mad :(
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  10. think i fixed predicting shape

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  11. changed PySRSequenceRegressor to inherit from BaseEstimator and have … 

    …PySRRegressor as an attribute
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  13. padding with NaNs does not work

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  14. made extrapolating when prredicting work :)

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  16. updated dosctring to have extra_preditciotns

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Commits on Aug 1, 2024

  1. tried delegation but this doesn't work

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Commits on Aug 2, 2024

  1. forwarded all methods and properties from PySRRegressor to PySRSequec… 

    …neRegressor
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Commits on Aug 6, 2024

  1. finally fixed the bug in variable name test

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  2. removed unecessary variables

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  3. updated docstring

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  4. added __getstate__ to PySRSequenceRegressor

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  5. update docstring

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  6. added super().__init()

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  7. removed n_features_in

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  8. example.py is back

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  9. variable names for unnamed 1D sequences work now

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Commits on Aug 7, 2024

  1. latex table no longer says y, but xt_0 (or whatever the variable name… 

    … is)
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  2. added docstring for complexity of variables

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  3. grammar is hard

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  4. remove unused imports

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  5. uncomment tests

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  6. newlines??

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  7. put a comment back

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Commits on Aug 8, 2024

  1. new inherits

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  2. remove y units

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  3. remove show pickel warnings

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  4. removed a lot of unneccesary properties

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  5. removed __getstate__

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  6. removed some commmented out code

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Commits on Aug 9, 2024

  1. since recursive history length >= 1, we don't need to test for len(X)… 

    … < 2 bcuz recursive_history_length covers that
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  2. more tests

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  3. update dosctring

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  4. more tests

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  5. more tests

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Commits on Aug 10, 2024

  1. Merge branch 'master' into recurrence

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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  3. ok i think from_file works now

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  5. so i think we need to pickle recursive history length :(

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  7. remove debug print

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  8. ok fromfile actually works now

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  9. added weight test

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  10. added feature name and selection mask tests

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  11. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  12. add recursive history length parameter

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  13. fixed typing for variable names in fit

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Commits on Aug 13, 2024

  1. removed julia properties

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  2. changed from_file to use PySRRegressor's from_file

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  3. removed uncessary line

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  4. moved args??? 

    python is weird
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  5. a lot of **kwargs

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  6. removed super().__init__()

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  7. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  8. updated numpy to 1.20 in environment.yml

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  9. changed __repr__ to only change first instance

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  10. updated latex_table to use PySRRegressor's latex_table, also added ou… 

    …tput_variable_names parameter to latex_table
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  11. removed MultiOutputMixin, RegressorMixin

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  12. fixed bug with output_variable_names

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  13. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  14. Merge branch 'master' into recurrence

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Commits on Aug 15, 2024

  1. add back super().__init__() 

    slightly confused

Co-authored-by: Miles Cranmer <[email protected]>
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  2. stars and stuff 

    Co-authored-by: Miles Cranmer <[email protected]>
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  3. another star 

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  4. remove unused imports

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  5. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  6. refactor: moved np.lib.stride_tricks.sliding_window_view out to anoth… 

    …er function
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  7. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  8. Merge branch 'master' into recurrence

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  9. update doctoring 

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  10. update docstring for weights

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Commits on Aug 16, 2024

  1. rewrote extra predictions in predict() to use num_predictions

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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  3. fixed predicting and changed up tests

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  4. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  5. removed comments

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Commits on Aug 17, 2024

  1. updated docstring

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  2. updated docstring to remove y

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Commits on Aug 24, 2024

  1. Update docstring formatting 

    Co-authored-by: Miles Cranmer <[email protected]>
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  2. added a lot of *args 

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  3. Update predict docstring to add num_predictions times 

    Co-authored-by: Miles Cranmer <[email protected]>
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  4. fix error in predict docstring 

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  5. remove default in docstring 

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  6. add default to predict docstring somewhere else 

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  7. Merge branch 'master' into recurrence

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  8. added args to latex_table

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  9. changed variable name format

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Commits on Aug 26, 2024

  1. feat: allow 1D input

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  2. Update pysr/regressor_sequence.py

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  3. feat: pretty-print sequence index

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Commits on Aug 28, 2024

  1. sequence example

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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  3. update sequence example

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  4. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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Commits on Aug 29, 2024

  1. added markdown example docs

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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  3. removed example sequence file

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  4. removed some miskates in examples sequence

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  5. updated example sequence

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  6. moved sequence examples to examples.md

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  7. updated latex_table to use _t instead of _{t-0}

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  8. updated latex_table docstring to refer to PySRRegressor.latex_table

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  9. updated examples to not have X = np.array(X)

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  10. updated docs to use latex

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  11. removed warning if num_predictions < len(historical_X)

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  12. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  13. updated tests for new variable names

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  14. missed a few

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  15. ok all working now

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  16. whoops forgot to remove commetns

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  17. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  18. fixed a test in TestDimensionalConstraints

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Commits on Sep 2, 2024

  1. removed unecessary print

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Commits on Sep 3, 2024

  1. fix typing with a cast 

    is this cheating lol
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Commits on Oct 10, 2024

  1. Merge branch 'master' into recurrence

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