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Comment out all hspe installatation info despite being on an `if (FAL…
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lcolladotor committed Aug 23, 2024
1 parent ce1cb4c commit 02554d4
Showing 1 changed file with 10 additions and 10 deletions.
20 changes: 10 additions & 10 deletions vignettes/Deconvolution_Benchmark_DLPFC.Rmd
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Expand Up @@ -539,16 +539,16 @@ here):
```{r "prep and run hspe"}
if (FALSE) {
## Install hspe
if (!requireNamespace("hspe", quietly = TRUE)) {
## Install version 0.1 which is the one listed on the main documentation
## at https://github.com/gjhunt/hspe/tree/main?tab=readme-ov-file#software
remotes::install_url("https://github.com/gjhunt/hspe/raw/main/hspe_0.1.tar.gz")
## Alternatively, install from the latest version on GitHub with:
# remotes::install_github("gjhunt/hspe", subdir = "lib_hspe")
## As of 2024-08-23, it's been 3 years since files were last modified
## at https://github.com/gjhunt/hspe/tree/main/lib_hspe.
}
# if (!requireNamespace("hspe", quietly = TRUE)) {
# ## Install version 0.1 which is the one listed on the main documentation
# ## at https://github.com/gjhunt/hspe/tree/main?tab=readme-ov-file#software
# remotes::install_url("https://github.com/gjhunt/hspe/raw/main/hspe_0.1.tar.gz")
# ## Alternatively, install from the latest version on GitHub with:
# # remotes::install_github("gjhunt/hspe", subdir = "lib_hspe")
#
# ## As of 2024-08-23, it's been 3 years since files were last modified
# ## at https://github.com/gjhunt/hspe/tree/main/lib_hspe.
# }
library("hspe")
# pseudobulk the sce data by sample + cell type
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