First version

.bumpversion.cfg

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+[bumpversion]
+current_version = 1.0.0
+commit = False
+message = service version: {current_version} → {new_version}
+tag = False
+
+[bumpversion:file:.osparc/metadata.yml]
+search = {current_version}
+replace = {new_version}
+
+[bumpversion:file:Makefile]
+search = {current_version}
+replace = {new_version}
+
+[bumpversion:file:docker compose-local.yml]
+search = {current_version}
+replace = {new_version}

.cookiecutterrc

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+# This file exists so you can easily regenerate your project.
+#
+# `cookiepatcher` is a convenient shim around `cookiecutter`
+# for regenerating projects (it will generate a .cookiecutterrc
+# automatically for any template). To use it:
+#
+#    pip install cookiepatcher
+#    cookiepatcher gh:itisfoundation/cookiecutter-osparc-service project-path
+#
+# See:
+#    https://pypi.python.org/pypi/cookiepatcher
+#
+# Alternatively, you can run:
+#
+#    cookiecutter --overwrite-if-exists --config-file=project-path/.cookiecutterrc gh:itisfoundation/cookiecutter-osparc-service
+#
+
+default_context:
+
+    _checkout:                 None
+    _output_dir:               '/home/iavarone/repos'
+    _repo_dir:                 '/home/iavarone/.cookiecutters/cookiecutter-osparc-jupyterlab-service'
+    _template:                 'git+ssh://[email protected]/ITISFoundation/cookiecutter-osparc-jupyterlab-service'
+    author_affiliation:        "IT'IS Foundation"
+    author_email:              '[email protected]'
+    author_name:               'Elisabetta Iavarone'
+    contact_email:             '[email protected]'
+    docker_base:               'custom:julia'
+    git_repo:                  'github'
+    git_username:              'elisabettai'
+    number_of_inputs:          '4'
+    number_of_outputs:         '4'
+    project_name:              'Jupyterlab Julia'
+    project_package_name:      'jupyterlab_julia'
+    project_short_description: 'JupyterLab coding environment for creating interactive Jupyter Notebooks with Julia (or Python)'
+    project_slug:              'jupyterlab-julia'
+    release_date:              '2024'
+    resources_CPU_nanoCPUs:    '4000000000'
+    resources_RAM_nanoBytes:   '16000000000'
+    version:                   '1.0.0'

.github/ISSUE_TEMPLATE/ask_question.md

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+---
+name: 💬 Question
+about: Ask a question
+labels: question
+---
+
+## What version of this service are you using?
+
+<!--
+Different ways are possible. 
+If you have the service open in o²S²PARC, the service version can be found under the "More Options" menu: 
+-->
+
+## How can we help you?

.github/ISSUE_TEMPLATE/bug_report.md

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+---
+name: 🐛 Bug
+about: File a bug/issue
+labels: bug
+---
+
+## What version of this service are you using?
+
+
+
+
+<!--
+Different ways are possible. 
+If you have the service open in o²S²PARC, the service version can be found under the "More Options" menu: 
+-->
+## Long story short
+
+<!-- Please describe your problem and why the fix is important. -->
+
+## Expected behaviour
+
+<!-- What is the behaviour you expect? -->
+
+## Actual behaviour
+
+<!-- What's actually happening? -->
+
+## Steps to reproduce
+
+<!-- Please describe steps to reproduce the issue.
+     If you have a script that does that please include it here within
+     markdown code markup -->
+
+## Your environment
+
+<!-- Describe the environment you have that lead to your issue.
+     This includes aiohttp version, OS, proxy server and other bits that
+     are related to your case.
+
+     IMPORTANT: aiohttp is both server framework and client library.
+     For getting rid of confusing please put 'server', 'client' or 'both'
+     word here.
+     -->

.github/ISSUE_TEMPLATE/feature_request.md

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+---
+name: ✨  Feature request
+about: Suggest an idea to implement
+labels: enhancement
+---
+
+## User Story
+
+<!-- A clear and concise description of how the feature works and looks like from the user's perspective.
+
+Ex. I want to be able the stop the running pipeline by pressing a stop button. If the pipeline is stopped, I see a info-level message confirming it in the logger, if it fails the message should be displayed in red (error). Also, all the progress bars in the nodes must be set to 0. -->
+
+## Example
+
+<!-- Any file/screenshot/photomontage/video/website is provided for a better understanding of the request -->
+
+
+## Definition of Done
+<!--
+A clear and concise description of what the feature requires.
+
+1. Play button turns into stop button when pipeline is running
+2. Stop button turns into play button when pipeline is finished
+3. Stop button turns into play button when pipeline is successfully stopped
+4. Logger displays messages everytime the play/stop button is pressed
+5. Progress bars are set to 0 when stopping pipeline
+6. Stop button has a Python interface -->

.github/workflows/check-image.yml

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+name: Build and check image
+
+on: [push, pull_request]
+
+jobs:
+  verify-image-build:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout repo content
+        uses: actions/checkout@v2
+      - name: ooil version
+        uses: docker://itisfoundation/ci-service-integration-library:v1.0.4
+        with:
+          args: ooil --version
+      - name: Assemble docker compose spec
+        uses: docker://itisfoundation/ci-service-integration-library:v1.0.4
+        with:
+          args: ooil compose
+      - name: Build all images if multiple
+        uses: docker://itisfoundation/ci-service-integration-library:v1.0.4
+        with:
+          args: docker compose build

.gitignore

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+## Common.gitignore
+
+# temporary folders
+tmp/
+
+# explicit mark
+*ignore*
+.tmp*
+
+# vscode configuration
+.vscode
+
+# make outputs
+pytest_*.xml
+docker-compose.yml
+
+# validation folder
+!validation/**/*
+# docker ignore
+!.dockerignore
+# git ignore
+!.gitignore

.osparc/docker-compose.overwrite.yml

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+version: "3.7"
+services:
+  jupyterlab-julia:
+    build:
+      dockerfile: Dockerfile

.osparc/metadata.yml

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+name: Jupyterlab Julia
+key: simcore/services/dynamic/jupyterlab-julia
+type: dynamic
+integration-version: 2.0.0
+version: 1.0.0
+description: JupyterLab coding environment for creating interactive Jupyter Notebooks with Julia (or Python)
+contact: [email protected]
+thumbnail: https://ih1.redbubble.net/image.1456778886.5914/bg,f8f8f8-flat,750x,075,f-pad,750x1000,f8f8f8.jpg
+authors:
+  - name: Elisabetta Iavarone
+    email: [email protected]
+    affiliation: IT'IS Foundation
+inputs:
+  input_1:
+    displayOrder: 1
+    label: input_file_1
+    description:
+      Any input files. One or several files compressed in a zip will be
+      downloaded in an inputs folder.   
+    type: data:*/*
+  input_2:
+    displayOrder: 2
+    label: input_file_2
+    description:
+      Any input files. One or several files compressed in a zip will be
+      downloaded in an inputs folder.   
+    type: data:*/*
+  input_3:
+    displayOrder: 3
+    label: input_file_3
+    description:
+      Any input files. One or several files compressed in a zip will be
+      downloaded in an inputs folder.   
+    type: data:*/*
+  input_4:
+    displayOrder: 4
+    label: input_file_4
+    description:
+      Any input files. One or several files compressed in a zip will be
+      downloaded in an inputs folder.   
+    type: data:*/*
+
+outputs:
+  output_1:
+    displayOrder: 1
+    label: output_files_1
+    description: Output files uploaded from the outputs folder
+    type: data:*/*
+  output_2:
+    displayOrder: 2
+    label: output_files_2
+    description: Output files uploaded from the outputs folder
+    type: data:*/*
+  output_3:
+    displayOrder: 3
+    label: output_files_3
+    description: Output files uploaded from the outputs folder
+    type: data:*/*
+  output_4:
+    displayOrder: 4
+    label: output_files_4
+    description: Output files uploaded from the outputs folder
+    type: data:*/*
+
+boot-options:
+  boot_mode:
+    label: Boot mode
+    description: Select boot type for the service (only for python-based ones)
+    default: "0"
+    items:
+      "0":
+        label: JupyterLab
+        description: Display the JupyterLab interface in the default boot mode
+      "1":
+        label: Voila
+        description:
+          To start as Voila save a notebook as "voila.ipynb" in the root
+          folder

.osparc/runtime.yml

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+restart-policy: no-restart
+settings:
+  - name: ports
+    type: int
+    value: 8888
+  - name: constraints
+    type: string
+    value:
+      - node.platform.os == linux
+  - name: Resources
+    type: Resources
+    value:
+      Limits:
+        NanoCPUs: 4000000000 
+        MemoryBytes: 16000000000 
+paths-mapping:
+  inputs_path: /home/jovyan/work/inputs
+  outputs_path: /home/jovyan/work/outputs
+  state_paths:
+    - /home/jovyan/work/workspace

CHANGELOG.md

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+# Changelog
+
+## [1.0.0] - 23 Apr. 2024
+- First version

Dockerfile

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+
+
+
+
+
+
+# Follow the instructions below to install the desired julia version in the base Jupyterlab image
+FROM "quay.io/jupyter/minimal-notebook:python-3.11" as base
+
+
+LABEL maintainer=elisabettai
+
+ENV JUPYTER_ENABLE_LAB="yes"
+# autentication is disabled for now
+ENV NOTEBOOK_TOKEN=""
+ENV NOTEBOOK_BASE_DIR="$HOME/work"
+
+USER root
+
+ENV HOME="/home/$NB_USER"
+
+# --------------- Add additional system libraries -------------------
+# TODO: do you need additional system libraries (e.g. zip, bc, etc...)?
+# If yes, uncomment the following and adapt
+# If not, remove the following (or leave commented)
+
+# RUN apt-get update && \
+#   apt-get install -y --no-install-recommends \
+#   bc \
+#   zip \
+#   && \
+#   apt-get clean && rm -rf /var/lib/apt/lists/* 
+
+
+
+
+
+
+
+
+USER root
+ENV COOKIE_JULIA_VERSION=1.6.0
+
+ENV JULIA_DEPOT_PATH=/opt/julia \
+    JULIA_PKGDIR=/opt/julia
+
+# Setup Julia
+COPY setup-scripts/ /opt/setup-scripts
+RUN /opt/setup-scripts/setup_julia.py ${COOKIE_JULIA_VERSION}
+
+USER ${NB_UID}
+
+# Setup IJulia kernel
+RUN /opt/setup-scripts/setup-julia-packages.bash
+
+# ------------------------- Other kernel -------------------------------------------
+# This will install the additional packages that from you Project.toml and Manifestl.toml in the pre-existing Julia kernel.
+COPY --chown=$NB_UID:$NB_GID env-config/julia/* ${JULIA_PKGDIR}
+RUN julia --project=${JULIA_PKGDIR} -e 'using Pkg; Pkg.instantiate()'
+## ------------------------------------------------------------------------
+
+
+# ---------------- Final setup  --------------------------------------------------------
+
+USER root
+
+RUN apt-get update && \
+   apt-get install -y --no-install-recommends \
+   gosu \
+   && \
+   apt-get clean && rm -rf /var/lib/apt/lists/* 
+
+# Run a script from the base image to fix files permission
+#RUN fix-permissions /home/$NB_USER
+
+# copy README and CHANGELOG
+COPY --chown=$NB_UID:$NB_GID README.ipynb ${NOTEBOOK_BASE_DIR}/README.ipynb
+COPY --chown=$NB_UID:$NB_GID CHANGELOG.md ${NOTEBOOK_BASE_DIR}/CHANGELOG.md
+
+# remove write permissions from files which are not supposed to be edited
+RUN chmod gu-w ${NOTEBOOK_BASE_DIR}/CHANGELOG.md && \
+  chmod gu-w ${NOTEBOOK_BASE_DIR}/${REQ_FILE}
+
+RUN mkdir --parents "/home/${NB_USER}/.virtual_documents" && \
+  chown --recursive "$NB_USER" "/home/${NB_USER}/.virtual_documents"
+ENV JP_LSP_VIRTUAL_DIR="/home/${NB_USER}/.virtual_documents"
+
+# Copying boot scripts
+COPY --chown=$NB_UID:$NB_GID boot_scripts/ /docker
+
+ENTRYPOINT [ "/bin/bash", "/docker/entrypoint.bash" ]