removed hard linking of HDF5 #55
Workflow file for this run
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| name: hdf5-iotest | ||
| # Controls when the action will run. | ||
| #Triggers the workflow on push or pull requests. | ||
| on: | ||
| push: | ||
| branches: [ liblink ] | ||
| pull_request: | ||
| branches: [ liblink ] | ||
| # A workflow run is made up of one or more jobs that | ||
| # can run sequentially or in parallel | ||
| jobs: | ||
| # This workflow contains a single job called "build" | ||
| build: | ||
| strategy: | ||
| matrix: | ||
| name: ["Ubuntu Latest GCC", "Ubuntu Latest GCC -- develop"] | ||
| include: | ||
| - name: "Ubuntu Latest GCC" | ||
| artifact: "Linux.tar.xz" | ||
| os: ubuntu-latest | ||
| hdf5: "release" | ||
| - name: "Ubuntu Latest GCC -- develop" | ||
| artifact: "Linux.tar.xz" | ||
| os: ubuntu-latest | ||
| hdf5: "develop" | ||
| name: ${{ matrix.name }} | ||
| # The type of runner that the job will run on. | ||
| runs-on: ${{ matrix.os }} | ||
| if: "!contains(github.event.head_commit.message, 'skip-ci')" | ||
| # Steps represent a sequence of tasks that will be executed | ||
| # as part of the job. | ||
| steps: | ||
| - name: Check out repository code | ||
| uses: actions/[email protected] | ||
| - name: Update repository code | ||
| run: | | ||
| sudo apt-get update | ||
| sudo apt-get install uuid-dev | ||
| - name: Install Dependencies (Linux--HDF5-release) | ||
| if: matrix.hdf5 == 'release' | ||
| run: | | ||
| sudo apt-get install -qq mpich | ||
| sudo apt-get install -qq libhdf5-mpich-dev | ||
| # Set env vars | ||
| echo "CC=mpicc" >> $GITHUB_ENV | ||
| echo "CPPFLAGS=-I/usr/include/hdf5/mpich" >> $GITHUB_ENV | ||
| echo "LDFLAGS=-L/usr/lib/x86_64-linux-gnu/hdf5/mpich" >> $GITHUB_ENV | ||
| echo "LD_LIBRARY_PATH=-L/usr/lib/x86_64-linux-gnu/hdf5/mpich" >> $GITHUB_ENV | ||
| echo "LIBS=-lhdf5" >> $GITHUB_ENV | ||
| - name: Install Dependencies (Linux--HDF5-develop) | ||
| if: matrix.hdf5 == 'develop' | ||
| run: | | ||
| # Use the newest stable gcc compiler | ||
| sudo apt-get install automake autoconf libtool libtool-bin | ||
| sudo apt-get install -qq mpich | ||
| ################################## | ||
| # INSTALL HDF5 FROM SOURCE | ||
| ################################## | ||
| git clone https://github.com/HDFGroup/hdf5.git | ||
| export HOME_DIR=$(echo ~) | ||
| cd hdf5 | ||
| export HDF5_DIR=$PWD/hdf5 | ||
| echo "HDF5_DIR=$HDF5_DIR" >> $GITHUB_ENV | ||
| ./autogen.sh | ||
| CC=mpicc ./configure --enable-build-mode=debug --without-szlib --disable-fortran --disable-hl \ | ||
| --disable-tests --disable-tools \ | ||
| --prefix=$HDF5_DIR \ | ||
| --enable-parallel | ||
| make -j 8 install | ||
| mydir="$PWD" | ||
| # echo "CPPFLAGS=-I$HDF5_DIR/include" >> $GITHUB_ENV | ||
| # echo "LDFLAGS=-L$HDF5_DIR/lib" >> $GITHUB_ENV | ||
| echo "CC=$HDF5_DIR/bin/h5pcc" >> $GITHUB_ENV | ||
| ################################## | ||
| # CONFIGURE (Autotools) | ||
| ################################## | ||
| - name: configure hdf5-iotest | ||
| run: | | ||
| ./autogen.sh | ||
| mkdir build; cd build | ||
| ../configure --prefix=$GITHUB_WORKSPACE/build | ||
| shell: bash | ||
| ################################## | ||
| # BUILD HDF5-iotest | ||
| ################################## | ||
| - name: test hdf5-iotest | ||
| run: | | ||
| cd build | ||
| make | ||
| make install | ||
| shell: bash | ||
