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Implemented conditional testing in pipeline
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Ben-EJ committed May 17, 2024
1 parent d3afe3d commit 69fb2ad
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84 changes: 77 additions & 7 deletions .github/workflows/pr-build.yml
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Expand Up @@ -7,7 +7,30 @@ on:
- 'main'

jobs:
run-pr-checks:
changes:
runs-on: ubuntu-latest
permissions:
pull-requests: read
outputs:
etl: ${{ steps.filter.outputs.etl }}
api: ${{ steps.filter.outputs.api }}
etl_tests: ${{ steps.filter.outputs.etl_tests }}
api_tests: ${{ steps.filter.outputs.api_tests }}
steps:
- uses: dorny/[email protected]
id: filter
with:
filters: |
etl:
- 'air-quality-backend/src/etl/**'
api:
- 'air-quality-backend/src/api/**'
etl_tests:
- 'air-quality-backend/tests/etl_tests/**'
api_tests:
- 'air-quality-backend/tests/api_tests/**'
run-lint:
runs-on: ubuntu-latest
defaults:
run:
Expand All @@ -20,18 +43,65 @@ jobs:
uses: conda-incubator/setup-miniconda@v3
with:
channels: conda-forge
environment-file: air-quality-backend/conda/etl_environment.yml
environment-file: air-quality-backend/conda/linting_environment.yml
auto-activate-base: false
activate-environment: etl
activate-environment: linting-env

- name: Run lint check
run: python -m flake8 --append-config air-quality-backend/.flake8 air-quality-backend

- name: Run unit tests
run: python -m pytest --cov=src --cov=scripts --cov-report=xml:air-quality-backend/tests/coverage/test_report.xml air-quality-backend/tests

etl:
needs: changes
if: ${{ needs.changes.outputs.etl == 'true' || needs.changes.outputs.etl_tests == 'true' }}
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- name: Checkout code
uses: actions/checkout@v4

- name: Setup miniconda
uses: conda-incubator/setup-miniconda@v3
with:
channels: conda-forge
environment-file: air-quality-backend/conda/etl_environment.yml
auto-activate-base: false
activate-environment: etl-dev

- name: Run etl unit tests
run: python -m pytest --cov=src --cov=scripts --cov-report=xml:air-quality-backend/tests/coverage/etl_test_report.xml air-quality-backend/tests/etl_tests

- name: Code Coverage Report
uses: orgoro/[email protected]
with:
coverageFile: air-quality-backend/tests/coverage/test_report.xml
coverageFile: air-quality-backend/tests/coverage/etl_test_report.xml
token: ${{ secrets.GITHUB_TOKEN }}

api:
needs: changes
if: ${{ needs.changes.outputs.api == 'true' || needs.changes.outputs.api_tests == 'true' }}
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- name: Checkout code
uses: actions/checkout@v4

- name: Setup miniconda
uses: conda-incubator/setup-miniconda@v3
with:
channels: conda-forge
environment-file: air-quality-backend/conda/api_environment.yml
auto-activate-base: false
activate-environment: api-dev

- name: Run api unit tests
run: python -m pytest --cov=src --cov=scripts --cov-report=xml:air-quality-backend/tests/coverage/api_test_report.xml air-quality-backend/tests/api_tests

- name: Code Coverage Report
uses: orgoro/[email protected]
with:
coverageFile: air-quality-backend/tests/coverage/api_test_report.xml
token: ${{ secrets.GITHUB_TOKEN }}
Binary file added air-quality-backend/conda/linting_environment.yml
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1 change: 1 addition & 0 deletions air-quality-backend/src/__init__.py
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e

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