Error in rule sizeFactors: jobid: 21

[aashishps]

I am also facing the same problem using C. Elegans genome from ensembl please help

Error in rule sizeFactors:
jobid: 21
output: uORFs/sfactors_lprot.csv
log: logs/sizeFactors.log (check log file(s) for error message)
conda-env: /home/ngslab/ashish/project/.snakemake/conda/5bc873a8
shell:
mkdir -p uORFs; uORF-Tools/scripts/generate_size_factors.R -t uORF-Tools/samples.tsv -b maplink/ -a uORFs/longest_protein_coding_transcripts.gtf -s uORFs/sfactors_lprot.csv 2> logs/sizeFactors.log;

Shutting down, this might take some time.
Exiting because a job execution failed. Look above for error message
Complete log: /home/ngslab/ashish/project/.snakemake/log/2020-04-04T005245.080262.snakemake.log

I also added ##format: gtf still it is not working

[aashishps]

is uORF tools only for mouse and human data sets?

[Hela06]

Hi! I am facing the same problem with human samples...The error in the sizeFactors.log file is the following:
"Error in readRDS(pfile) :
impossible to read workspace version 3 in R 3.6.0; needed version R 3.5.0 or more
Calls: library -> find.package -> lapply -> FUN -> readRDS
Esecuzione interrotta"

May you help me?

Thanks!