Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

individual workflow engine deps as extras? #505

Open
lukasheinrich opened this issue Apr 27, 2021 · 3 comments
Open

individual workflow engine deps as extras? #505

lukasheinrich opened this issue Apr 27, 2021 · 3 comments

Comments

@lukasheinrich
Copy link
Member

the individual workfflow enginess have separate dependencies that might not be needed if one does noot use that engine.

Would it be possible to e.g. declare those as extras a la

pip install reana-client[yadage]
pip install reana-client[cwl]

etc?

@tiborsimko
Copy link
Member

See also #174. There, we preferred to opt for appImage-like solution (that we still need to publicise) that would embed all the extras efficiently together. This works for CLI only though. Here, I guess you might be interested in Python API usage? Which would mean to revive those musing...

@mvidalgarcia
Copy link
Member

FWIW, we've made yadage an extra in reana-commons as it is installed both in reana-client and reana-workflow-engine-yadage

@mvidalgarcia
Copy link
Member

Same happens for snakemake, we should do the same for cwl.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants