From 742e49dfbd25c56d5249e5e014ab5a9aafdeb96f Mon Sep 17 00:00:00 2001 From: FarnazH Date: Mon, 1 Apr 2024 00:00:43 +0000 Subject: [PATCH] [create-pull-request] automated change --- _cite/.cache/cache.db | Bin 45056 -> 49152 bytes _data/citations.yaml | 92 ++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 92 insertions(+) diff --git a/_cite/.cache/cache.db b/_cite/.cache/cache.db index 59ea8e4b184ed5f3e6a954776511c890dc515fd3..35df281e4a190d73fec3ebd66dc98a0ad84b159d 100644 GIT binary patch delta 4606 zcmcgwdu&_P8TXCfiQ}6`n@1n%35B*$oY>BzO)0c#nxt`?G>W5^bpmr@pXA==`d;@w z(k5GLlR!(?3nMwEqNOx}t%Z%1!Tc8!+qz7X_E5((X-uGLV$&o9(=;(5_+x*t?_4)_ z(v?Zu#G=Z_-{9x)>o6Y8%MZ37N*B`mTQ@LViPOP}VZ+hQW z;eXM|JN<9?Z}=DeZ~OnwzwLjK|0#cs&+;euhxs0UD_@c0Dv$cgXQLW zd!t9wu`X)57}t27vz5XQ@W=bi2Kxq&j>lr6oFFGaqAPJla@Luf>4xStEt~8iuXaolbrRDi<+z|KvSMhp=3VxHZT|yCeF!NwXOS6pC=CN^{2nDx?sT!MG=i`Zu|CoQD zf0w_(U*~iDRsI5R@@Zb>Ne(^I&8K~KH`n>j!j{tCe*7h0L3niI56TKc|Io{&1!4V; z7Vnba&3)MFDF~TNpSvL3_rnp_lHmEQw9i=(e)(3wQ4lWfbi8aYNW)HCQf7C1JKvf9 z%}eh#JFF1=TLh^Bg6UI{A_5SK2tX(z0HKIr`cz*L0SH9|AQTZypW0VM074M~2p3TS z0Z7XboazMxELJ)H%yqldp7`?Fr)coWx;6DyaD$=da4@_wFX;8mYX2>&`RT2kmHIuSne!iZn5_19hU~WF&x7DKx66 zC@x?X$91BLQ=&YE7@-hR){vnwF{wxd>IAEZz-&Vo6&YbUfl|Vxq>K@n{_!dFzr*AmyFVb$EVOT7Wf^K*~si>n0dBoRo!XEq<0t6TqUH;Zwy zHqA9YzmAiYVS%821x z`Gg@<4G7g%IF`XaIA6cq3+8-hb!%2Lok>O31q(d{GDP2-Uq>C8Bc9f6Egj+ZaFC8> zHaZ`Dbg}UqD-3!y7{Iq^%+OI%1W%5LN|MkQ z&TaT_&YaKthLu2SXYTQbg2hx1g;=Vi*4A*Sy}hL)D;yFI8`xmcxmo5PxF_y9Yx(Uj zmsR@8lclKcZy&jrI6G&TedISypn} zisuNnWi>+>q-B`~diL~I8q0Vb>@2yjWN1kpu$#9WK3ujdwzA#cxO>1^TJi_mmD$e%pycF`jvVb`CeRg>J`taKo{pWc(WmcrWqBqW?^h#dLnoeERC6YD2 zD3Y7Znr`SG1Vz=d4`sKcOg2}m`oqwO>9Q3tkcQXsPF)a&g%*#2~g*Um% znIrb)Npjk?JV{!hsaeqmS*u@kylkyyjj$GsEJ;*Ik~`ANClpiU3n>1T$zfIwiR?;6 z2^48Uog)cRf()sGgup<67!5X|UKI;CN#D9qQ^EJBSRO}*!BQF_s!m_HR=w6NjS`6Z zUI+_B(l-R(_ef-1fEDs#Y6*mb0iXp4Q(BuCZJUBHoxQ)rZ<7l(HhbtlYY}hO9qU>w zms%sZ6h`LKBUbxjvjORtC1N65=rzI3w=|nYU;jU@vUKq-BjBv%Wor6{#U$!RgN6>C zgJRlGCg2v0LUdBBxT*(4csOAV^~1d^>r={@WI$+-z!1GK~P!C-Az%Q`x0Fc|_!U4-S zETb#BlcF?vQv<{e^y=$Yp`F=hsK-Tp3Jwx6Bv^NG;UFU{#sH|BT6^W_> zuufp_e&q!7OBKT_5$2g8)DMqdws$3P>~Sk92mh40FhE48>Wcj&%`&AEMFlbnkLGbe zJA@}uR41cYj%y+)AlxI&cW78q6@X@Copp#qSc7Npgf4;6u~>uBuQ94tsErKxGXLVpdsi| zWQ{?qSrOp~pp(a7JHXseBvI2WN9@A{{_lZp27Ra)2VEC4RHgy|L50{8)0;9zz+NEq z*u}e@p->>)%GhX));^w8fsI%v;B@!c{2P5@=`-F^chBpyt#12Fr;on(ZFUc^7aAiP z_SR%v&g5MCD@hI>&)@t`FSCGWn`L2*c{#^j3vlqTZhrMXW&v+G%fcG-axU{~hO^IX t^U`lU-N$U;iD%hZV_wdAW{+_28jsJheb~E?S+EzZb*sUcyFPc4`zKPm8+`x( delta 1505 zcmZvcZA@Eb6vyw=r@eily$^Ks4af!>AsR~|gkd735P}Tj3r0UJW9?1bt(Wx$+S?&h zvId+4bCazchK^-!Vko}EOua^AAIhO%)vy4w&304`OU_XvGHYuBJN)>J} zWn@v7GO`rTxRpBGjv`X#L~uk3pNL0;Bk7c!3a8=*w^9quz8X&rZZ&5{-jF&v{#=~T3yb0|*u(&w@}a03cw!Y zU13J}L3k1N4?Y7egS>iZ@TxU`TJJg9xFg(iN%(8X!yEki zw@nDP7oP)N&+u@Uubgf^xA@jK>{i0!@a8wa1vZ*{HhO3Im(Pk?6N-HQ288<1uId;a6v}M9{!hznz5Y+iY*duls3@~h zQD*D)FPGV+m(0-m{uAohr87FXan!8Zaw}N9 z_3lA)CC?Q&%T3c4yrlQ*LR=xApT$!hJjB-qoJAVe*chdvg==)`Piuz}GC_JX zwP_A57PTrZZ6c(D*Ot4fgB8piY$z-T)9Ui_8nS=Zh6p!lHyMpa6K6u)?K+qUPVLuB zv@tYl!z*bD?x)%J}(u;m^nJZt^Pa*zI5{%pZhJ!TkKVI5(& zi*gAti(1{fmP3C7 DL4*o- diff --git a/_data/citations.yaml b/_data/citations.yaml index 0cc985a..0e483e3 100644 --- a/_data/citations.yaml +++ b/_data/citations.yaml @@ -1,5 +1,75 @@ # DO NOT EDIT, GENERATED AUTOMATICALLY +- id: doi:10.1093/nar/gkad1082 + title: "The Monarch Initiative in 2024: an analytic platform integrating phenotypes,\ + \ genes\_and diseases across species" + authors: + - Tim E Putman + - Kevin Schaper + - Nicolas Matentzoglu + - "Vincent\_P Rubinetti" + - "Faisal\_S Alquaddoomi" + - Corey Cox + - J Harry Caufield + - Glass Elsarboukh + - Sarah Gehrke + - Harshad Hegde + - "Justin\_T Reese" + - Ian Braun + - "Richard\_M Bruskiewich" + - Luca Cappelletti + - Seth Carbon + - "Anita\_R Caron" + - "Lauren\_E Chan" + - "Christopher\_G Chute" + - "Katherina\_G Cortes" + - "Vin\xEDcius De\_Souza" + - Tommaso Fontana + - "Nomi\_L Harris" + - "Emily\_L Hartley" + - Eric Hurwitz + - "Julius\_O B Jacobsen" + - Madan Krishnamurthy + - "Bryan\_J Laraway" + - "James\_A McLaughlin" + - "Julie\_A McMurry" + - "Sierra\_A T Moxon" + - "Kathleen\_R Mullen" + - "Shawn\_T O\u2019Neil" + - "Kent\_A Shefchek" + - Ray Stefancsik + - Sabrina Toro + - "Nicole\_A Vasilevsky" + - "Ramona\_L Walls" + - "Patricia\_L Whetzel" + - David Osumi-Sutherland + - Damian Smedley + - "Peter\_N Robinson" + - "Christopher\_J Mungall" + - "Melissa\_A Haendel" + - "Monica\_C Munoz-Torres" + publisher: Nucleic Acids Research + date: '2023-11-24' + link: https://doi.org/gs6kmr + orcid: 0000-0002-4655-3773 + plugin: orcid.py + file: orcid.yaml +- id: doi:10.1101/2023.10.11.560955 + title: Integration of 168,000 samples reveals global patterns of the human gut microbiome + authors: + - Richard J. Abdill + - Samantha P. Graham + - Vincent Rubinetti + - Frank W. Albert + - Casey S. Greene + - Sean Davis + - Ran Blekhman + publisher: Cold Spring Harbor Laboratory + date: '2023-10-11' + link: https://doi.org/gsvf5z + orcid: 0000-0002-4655-3773 + plugin: orcid.py + file: orcid.yaml - id: doi:10.1093/nar/gkad289 title: 'MyGeneset.info: an interactive and programmatic platform for community-curated and user-created collections of genes' @@ -64,6 +134,28 @@ orcid: 0000-0002-4655-3773 plugin: orcid.py file: orcid.yaml +- id: doi:10.1101/2022.02.18.461833 + title: 'MolEvolvR: A web-app for characterizing proteins using molecular evolution + and phylogeny' + authors: + - Jacob D Krol + - Joseph T Burke + - Samuel Z Chen + - Lo M Sosinski + - Faisal S Alquaddoomi + - Evan P Brenner + - Ethan P Wolfe + - Vincent P Rubinetti + - Shaddai Amolitos + - Kellen M Reason + - John B Johnston + - Janani Ravi + publisher: Cold Spring Harbor Laboratory + date: '2022-02-22' + link: https://doi.org/gstx7j + orcid: 0000-0002-4655-3773 + plugin: orcid.py + file: orcid.yaml - id: doi:10.1186/s13059-020-02021-3 title: Compressing gene expression data using multiple latent space dimensionalities learns complementary biological representations