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postasm
PublicQC and tidying on assembled genomes.pante
Publicqcflow
PublicPerform basic QC on illumina datamitoflow
PublicA small pipeline for assembling mitochondrial genomes and filtering reads prior to assembly.predector
Publicpredector-utils
PublicLR-toolkit
Publicccdmb.github.io
Publicnanopore_assembly
Publicbarley-DH-pow-rnaseq
PublicR_Script_templates
Publiccatastrophy
PublicCATAStrophy predicts filamentous plant pathogen lifestyle characteristics based on their CAZyme composition.wheat-agr-tanspot
Publicslurm_scripts
PublicPTR-60
Publiccatastrophy-pipeline
Public archivepredector-data
PublicBioDendro
PublicA package to cluster and visualise MS/MS spectral databarley-pow-rnaseq
PublicPathoPore
Publicmumflow
PublicA nextflow pipeline to run the mummer pipelines (align genomes, call snps) and process outputs into sane formats.snptree
PublicA nextflow pipeline to run phylogenetic analyses using SNPspclust
PublicA nextflow pipeline to cluster sets of proteins.panann
PublicPipelines for gene and TE annotation of pangenomes.