Repositories list

• StaticContent

  Public
  HTML

  •

  Apache License 2.0

  •6•0•0•4•Updated Nov 19, 2024Nov 19, 2024

• ApiCommonWorkflow

  Public
  Perl

  •

  Apache License 2.0

  •1•0•0•5•Updated Nov 19, 2024Nov 19, 2024

• ApiCommonData

  Public
  Perl

  •

  Apache License 2.0

  •3•3•0•4•Updated Nov 19, 2024Nov 19, 2024

• vdi-service

  Public
  vdi

  Kotlin

  •

  Apache License 2.0

  •0•0•39•0•Updated Nov 19, 2024Nov 19, 2024

• ApidbSchema

  Public
  SQL and scripts to install the ApiDB schema

  PLSQL

  •

  Apache License 2.0

  •0•0•0•4•Updated Nov 19, 2024Nov 19, 2024

• ApiCommonWebsite

  Public
  Perl

  •

  Apache License 2.0

  •1•3•0•1•Updated Nov 19, 2024Nov 19, 2024

• EbrcWebsiteCommon

  Public
  Perl

  •

  Apache License 2.0

  •3•3•8•3•Updated Nov 19, 2024Nov 19, 2024

• OrthoMCLService

  Public
  Project containing OrthMCL-specific services, built on Ebrc common libraries

  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• OrthoMCLModel

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•1•Updated Nov 19, 2024Nov 19, 2024

• web-monorepo

  Public
  A monorepo that contains all frontend code for VEuPathDB websites

  TypeScript

  •

  Apache License 2.0

  •0•2•180•20•Updated Nov 19, 2024Nov 19, 2024

• ms-peptides-nextflow

  Public
  Trolls older mass spec experiments and maps the peptides onto the current proteome.

  Perl

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• docker-tools

  Public
  Perl

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• util-infra-dev-tools

  Public
  Go

  •

  Apache License 2.0

  •0•0•1•0•Updated Nov 18, 2024Nov 18, 2024

• EbrcModelCommon

  Public
  Java

  •

  Apache License 2.0

  •2•1•4•2•Updated Nov 18, 2024Nov 18, 2024

• orthoFinder-nextflow

  Public
  orthoFinder Nextflow workflow

  Python

  •

  MIT License

  •0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

• OrthoMCLWebsite

  Public
  Apache License 2.0

  •0•0•0•1•Updated Nov 18, 2024Nov 18, 2024

• MicrobiomeWebsite

  Public
  R

  •

  Apache License 2.0

  •0•2•2•1•Updated Nov 18, 2024Nov 18, 2024

• ClinEpiWebsite

  Public
  CSS

  •

  Apache License 2.0

  •0•2•3•1•Updated Nov 18, 2024Nov 18, 2024

• trna-scan-nextflow

  Public
  Nextflow workflow for tRNAScanTask

  Nextflow

  •

  Apache License 2.0

  •1•0•0•0•Updated Nov 18, 2024Nov 18, 2024

• protein-statistics-nextflow

  Public
  This tool will calculate protein statistics given a fasta file of proteins.

  Perl

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

• ApiCommonModel

  Public
  Perl

  •

  Apache License 2.0

  •0•1•1•6•Updated Nov 17, 2024Nov 17, 2024

• conifer

  Public
  Configuration management tool for VEuPathDB GUS-based websites

  Python

  •

  Apache License 2.0

  •0•0•0•2•Updated Nov 15, 2024Nov 15, 2024

• ebi2gus

  Public
  Code related to representing data from E! Core workflow in GUS schema

  Perl

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• mitoprot-nextflow

  Public
  Nextflow Conversion of mitoprot tool

  Nextflow

  •

  MIT License

  •1•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• marker-gene-analysis-16s-DADA2-nextflow

  Public
  Nextflow Conversion of ASVTableTask.pm

  R

  •

  MIT License

  •1•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• gpi-anchor-prediction-nextflow

  Public
  Nextflow

  •

  MIT License

  •1•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• bowtie-mapping-nextflow

  Public
  Nextflow conversion of BowtieMappingTask

  Nextflow

  •

  MIT License

  •1•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• blast-similarity-nextflow

  Public
  Nextflow workflow for blastSimilarity

  Perl

  •

  Apache License 2.0

  •1•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• websiteconf

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• psipred-nextflow

  Public
  Nextflow Workflow for moving away from DJOB

  Nextflow

  •

  Apache License 2.0

  •1•0•0•0•Updated Nov 14, 2024Nov 14, 2024