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@EcoDynIZW Ecological Dynamics Department

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    48 repositories

    • EcoDynIZW.github.io

      Public
      We are the Department of Ecological Dynamics of the Leibniz IZW! This repository stores the distill webpage of the department.
      ecologydiseasespopulation-dynamicsecology-modellingdisease-modelingcommunity-dynamics
      HTML
      •2•4•0•0•Updated Nov 18, 2024Nov 18, 2024

    • GEE-PICX

      Public
      R
      •0•1•0•0•Updated Nov 15, 2024Nov 15, 2024

    • Drenske_2024_FrontEcolEvol

      Public
      R
      •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • Grabow_2024_COMMSBIOL

      Public
      R
      •
      MIT License
      •1•0•0•0•Updated Oct 16, 2024Oct 16, 2024

    • d6berlin

      Public
      R package that provides spatial data and template maps for Berlin. The data sets include green spaces, water bodies, district borders, raleways and more. A template map of imperviousness across Berlin with carefully chosen and aesthetically pleasing default is included to serve as a base map to visualize spatial data.
      berlinworkflowmappingcartographytemplatesrstatsrspatialggplot2
      R
      •
      Other
      •1•5•1•1•Updated Oct 14, 2024Oct 14, 2024

    • d6geodata

      Public
      R package to maintain geodata of D6 research projects. The package provides functions to get, manage and plot geodata
      R
      •
      MIT License
      •0•1•0•0•Updated Sep 27, 2024Sep 27, 2024

    • Alexiou_2024_WILDL-BIOL

      Public
      Unsustainable hunting and habitat loss have led to widespread mammal population declines in Southeast Asia, and evidence-based conservation is needed to prevent further declines.
      R
      •
      MIT License
      •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

    • Planillo_2024_WILDL-BIOL

      Public
      Demographic analysis of wolf population in Germany 2000-2020
      R
      •1•0•0•0•Updated Sep 16, 2024Sep 16, 2024

    • Struebig_2024_BIOCON

      Public
      R
      •0•0•0•0•Updated Aug 29, 2024Aug 29, 2024

    • Sollmann_Caro_2024_EcolEvol

      Public
      Data and code for "Spatio-temporal metapopulation trends: the coconut crabs of Zanzibar", Sollmann, R., Caro, T. (2024), Ecology and Evolution.
      R
      •0•0•0•0•Updated Jul 17, 2024Jul 17, 2024

    • d6atlas

      Public
      R package that provides a fast and friendly way to plot data in the ATLAS experimental area in the Uckermark, Brandenburg.
      R
      •
      Other
      •0•1•2•0•Updated Jul 10, 2024Jul 10, 2024

    • Sollmann_et_al_2024_PCJ

      Public
      Data and code for nestling count model accounting for false negatives and positives
      R
      •0•0•0•0•Updated Jul 10, 2024Jul 10, 2024

    • d6

      Public
      R package to simplify workflows of D6 research projects. The package provides utilities to set up a standardized folder structure and version control, and Rmarkdown templates and rendering functionality for a reproducible workflow.
      workflowversion-controlrmarkdownreproducible-scienceproject-managementreproducibilityrstats
      HTML
      •1•10•1•0•Updated Jun 20, 2024Jun 20, 2024

    • d6projdata

      Public
      R package that is designed to extract the rawdata of a project, create meta data and save it in a standardised way to use it in future projects. Intended for internal use only.
      ggplot2rstudioproject-management
      R
      •
      Other
      •0•0•1•0•Updated Jun 10, 2024Jun 10, 2024

    • Tilker_Niedballa_2024_CONL

      Public
      Addressing the Southeast Asian snaring crisis: Impact of 11 years of snare removal in a biodiversity hotspot
      R
      •
      MIT License
      •0•0•0•0•Updated Jun 3, 2024Jun 3, 2024

    • Scholz_2024_STOTEN

      Public
      Analysis of Metabarcoding Fox
      R
      •1•0•0•0•Updated May 29, 2024May 29, 2024

    • d6_teaching_collection

      Public
      HTML
      •3•1•0•0•Updated Mar 15, 2024Mar 15, 2024

    • Kuerschner_2024_EcolEvol

      Public
      NetLogo
      •1•0•0•0•Updated Feb 15, 2024Feb 15, 2024

    • Sollmann_2024_PCJ

      Public
      Data and code for "Mt or not Mt: Temporal variation in detection probability in spatial capture-recapture and occupancy models", Sollmann, R., Peer Community Journal (submitted)
      R
      •0•1•0•0•Updated Jan 8, 2024Jan 8, 2024

    • Schmied_2024_WildlBiol

      Public
      "Effect of human induced surface water scarcity on herbivore distribution during the dry season in Ruaha National Park, Tanzania"
      R
      •0•0•0•0•Updated Dec 11, 2023Dec 11, 2023

    • overlap

      Public
      R package: estimation of overlap of activity patterns
      R
      •1•0•0•0•Updated Nov 21, 2023Nov 21, 2023

    • Planillo_2023_DivDist

      Public
      Scripts for running non-stationary habitat suitability of wolves in Germany
      R
      •1•0•0•0•Updated Nov 21, 2023Nov 21, 2023

    • Calderon_2022_AnimCons

      Public
      "Occupancy models reveal potential of conservation prioritization for Central American jaguars"
      R
      •0•0•0•0•Updated Nov 20, 2023Nov 20, 2023

    • Naciri_2023_BiolConserv

      Public
      "Three decades of wildlife-vehicle collisions in a protected area: Main roads and long-distance commuting trips to migratory prey increase spotted hyena roadkills in the Serengeti"
      R
      •1•0•0•0•Updated Nov 20, 2023Nov 20, 2023

    • Marescot_Franz_Benhaiem_2021_JAnimEcol

      Public
      "‘Keeping the kids at home’ can limit the persistence of contagious pathogens in social animals"
      HTML
      •1•0•0•0•Updated Nov 20, 2023Nov 20, 2023

    • imageseg

      Public
      R package for deep learning image segmentation
      tensorflowkerasimage-segmentation
      R
      •
      Other
      •2•19•0•0•Updated Nov 17, 2023Nov 17, 2023

    • Kuerschner_2021_EcolEvol

      Public
      "Movement can mediate temporal mismatches between resource availability and biological events in host–pathogen interactions"
      csfrstatsdiseaseagent-based-modelingautocorrelationnetlogodisease-spreadanimal-movementspatially-explicit-modelsspatiotemporal-dynamics
      NetLogo
      •0•1•0•0•Updated Oct 9, 2023Oct 9, 2023

    • Sollmann_2023_Ecosphere

      Public
      Scripts for simulation evaluation of temporal scale model (Sollmann 2023, Ecosphere)
      R
      •0•0•0•0•Updated Sep 6, 2023Sep 6, 2023

    • Caro_2023_AnimConserv

      Public
      Data and code for "Meta- and subpopulation estimation with disparate data: coconut crabs in the Western Indian Ocean.", Caro et al., Animal Conservation (2023)
      R
      •0•0•0•0•Updated Sep 5, 2023Sep 5, 2023

    • Rocha_Sollmann_2023_AnimConserv

      Public
      Data for "Habitat use patterns suggest that climate-driven vegetation changes will negatively impact mammal communities in the Amazon."
      R
      •0•0•0•0•Updated Apr 28, 2023Apr 28, 2023