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angular distribution function - periodic boundary conditions #304

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bananenpampe opened this issue Apr 14, 2024 · 0 comments
Open

angular distribution function - periodic boundary conditions #304

bananenpampe opened this issue Apr 14, 2024 · 0 comments

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@bananenpampe
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I am computing the angular distribution function for a system with and without periodic boundary conditions. I am under the impression, that when periodic boundary conditions are enforced, there are artifacts introduced for small angles.

frames = ase.io.read("test.xyz",index="::5")
for frame in frames:
    frame.wrap(eps=1e-12)

mol = MultiMolecule.from_ase(frames)
adf = mol.init_adf(r_max="3.73", weight=None)

# or  adf = mol.init_adf(r_max="3.73", weight=None, periodic="xyz")

output
output_w_pbc

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