From 67b5b4159da8d0acfb86d29c0c1a264bb247dde6 Mon Sep 17 00:00:00 2001
From: Chris Wright <chris.wright@nanoporetech.com>
Date: Thu, 28 Feb 2019 17:05:08 +0000
Subject: [PATCH] Add changelog and bump version

---
 CHANGELOG.md               | 76 ++++++++++++++++++++++++++++++++++++++
 fast5_research/__init__.py |  2 +-
 2 files changed, 77 insertions(+), 1 deletion(-)
 create mode 100644 CHANGELOG.md

diff --git a/CHANGELOG.md b/CHANGELOG.md
new file mode 100644
index 0000000..2c4f852
--- /dev/null
+++ b/CHANGELOG.md
@@ -0,0 +1,76 @@
+
+v1.2.12
+-------
+* Clear up a deprecation warning: https://github.com/nanoporetech/fast5_research/issues/30
+
+
+v1.2.11
+* Add `filter_reads` program to extract a subset of reads from multi-reads.
+
+
+v1.2.10
+-------
+* Minor syntax fix in `extract.py` for python2
+
+v1.2.9
+------
+* Add basic support for creation of multi-read files from bulk files.
+
+v1.2.8
+------
+* Small refactor of writing of mapping data.
+
+v1.2.6
+------
+* Fix slow creation of mapping table
+
+v1.2.5
+------
+* Ensure event structures containing text data are returned as strings rather than bytes under python3.
+
+v1.2.3
+------
+* Fixes issue with numpy 1.15 on reading type of views of structured data.
+* Updated documentation (https://nanoporetech.github.io/fast5_research/)
+
+v1.2.2
+------
+* Conversion from bulk to reads.
+* Require numpy >= 1.14.
+* A bit more python3 bytes cleaning.
+* Enforce types in raw, and required tracking_id attributes.
+
+v1.1.0
+------
+* Python3 compatibility changes
+* Add data cleaning steps for stringly types
+* Unpin numpy version
+
+v1.0.12
+-------
+* Enforce some typing constraints on meta data for compatibility with some basecallers.
+
+v1.0.11
+-------
+* Ignore h5py warnings on import
+
+v1.0.10
+-------
+* Fix bug finding attributes when EventDetection not present
+
+v1.0.8
+------
+* Easy import of core classes and functions:
+    `from fast5_research import Fast5, BulkFast5, iterate_fast5`
+* Enable recursive (lazy) search in `iterate_fast5`.
+
+v1.0.9
+------
+* Fix itertools import
+
+v1.0.6
+------
+* Ensure returned events have same dtype
+* fast5.py: all returned event arrays same dtype by passing them through self._get_read_data()
+* requirements: use any version of numpy
+* bump version to 1.0.6 
diff --git a/fast5_research/__init__.py b/fast5_research/__init__.py
index 05d2efe..f2762dc 100644
--- a/fast5_research/__init__.py
+++ b/fast5_research/__init__.py
@@ -1,4 +1,4 @@
-__version__ = '1.2.12'
+__version__ = '1.2.13'
 
 from fast5_research.fast5 import Fast5, iterate_fast5
 from fast5_research.fast5_bulk import BulkFast5