- Release date: TBA
- New shear implementation using infinitesimal displacement formalism (Merkel et al 2016)
- New mqf* libraries that enable interpolation of data, keep the old library still available
- New Docker image including newer version of R, RstudioServer and dependencies
- Host user ID mapping to the docker container
- Release date: October 9th, 2017
- Bug fix in image format conversion by imagemagick (creation of original.png from RGB files)
- Bug fix in applying user-defined configuration files
- Commited changes in the existing docker image
- Corresponding user manual
- Release date: May 1st, 2017
- Bug fixe in UserRoiTracking.R: fixed border cell status ambiguities that caused duplicated cell_id and merge failure in rare cases
- Commited changes in the existing docker image
- Release date: Nov 16th, 2016
- Enabled version check for updates
- Security: now runs the workflow with user permissions and solve permission issues when using docker on Linux
- Control of resource allocation
- Can now run the workflow without network connection
- Corresponding user manual
- Release date: May 2016
- RStudio server was added to the docker image for running TissueMiner API from within a fully configured RStudio and R environment along with a fully configured Ubuntu environment
- Corresponding user manual