From 43be63ac624e5adcd3d019a695c1b7261de402d2 Mon Sep 17 00:00:00 2001 From: adRn-s Date: Tue, 29 Oct 2024 09:45:37 +0100 Subject: [PATCH] other organisms --- BRB/PushButton.py | 14 ++++---------- 1 file changed, 4 insertions(+), 10 deletions(-) diff --git a/BRB/PushButton.py b/BRB/PushButton.py index 08c4623..4f354da 100755 --- a/BRB/PushButton.py +++ b/BRB/PushButton.py @@ -19,18 +19,12 @@ 'D. melanogaster (dm6)': 'drosophila', 'D. rerio (GRCz11)': 'zebrafish', 'G. gallus (GRCg7b)': 'chicken', + 'A. aegypti (AaegL5)': 'Aedes_aegypti', + 'A. gambiae (AgamP4)': 'Anopheles_gambiae', + 'C. elegans (WS285)': 'Caenorhabditis_elegans', + 'R. prolixus (RproC3)': 'Rhodnius_prolixus', } -# Are we supporting these? What are their mappings? - # 'Aedes_aegypti': '?', - # 'A. aegypti (AaegL5)': '?', - # 'Anopheles_gambiae': '?', - # 'A. gambiae (AgamP4)': '?', - # 'Caenorhabditis_elegans': '?', - # 'C. elegans (WS285)': '?', - # 'Rhodnius_prolixus': '?', - # 'R. prolixus (RproC3)': '?', - def createPath(config, group, project, organism, libraryType, tuples): """Ensures that the output path exists, creates it otherwise, and return where it is"""