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Pseudomolecule length does not match show-tiling #7

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mjnetherland19 opened this issue Dec 13, 2020 · 0 comments

mjnetherland19 commented Dec 13, 2020

Hello,

The nucleotide length of the output from show-tiling does not match the pseudomolecule length.

With the command wc -c the length of the pseudomolecule is 133,508

However, the alignment to the reference extends to 165,369. I am working with chloroplast genomes

I have attached the show-tiling output.

I hope you may have some insight into this discrepancy.

Thank you for your time.

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