Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Checking bgen file with bgenix, running across the issue #13

Open
pwu4 opened this issue Feb 7, 2023 · 0 comments
Open

Checking bgen file with bgenix, running across the issue #13

pwu4 opened this issue Feb 7, 2023 · 0 comments

Comments

@pwu4
Copy link

pwu4 commented Feb 7, 2023

Before using python (bgen_reader), I want to check the integrity of the data. (I downloaded a shared large dataset(~50G) by wget. namely, gwas_c20_b0_v3.bgen)

Do you have any clue about this? Thanks so much.

bgenix -g gwas_c20_b0_v3.bgen

Welcome to bgenix
(version: 1.1.7, revision )

(C) 2009-2017 University of Oxford

terminate called after throwing an instance of 'std::length_error'
what(): vector::_M_default_append
Aborted (core dumped)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant