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Predicting Alignment Algorithm Performance Using Machine Learning

Repository for code of the paper. Instruction on replicating the experiments is included.

Things included:

  • ProM jars of CLASSIC, CLASSIC-SP, RECOMPOSE, RECOMPOSE-SP algorithms
  • Experimental setup for running experiments using the algorithms
  • Experimental setup for training predictive algorithms
  • Jupyter notebooks for the statistics and images of the paper

Note: unfortunately due to the file size limit on GitHub repository, the data and trained predictive model cannot be included.

How to produce performance data?

  1. Install python package into virtual environment
virtualenv -p python3.6 alignclf-venv
source alignclf-venv/bin/activate
python setup.py install
  1. Create configuration files to run alignment algorithms using CLI
make-configs // follow the instructions
  1. Run the bash scripts to perform alignment experiments
sh configs/batch.sh
  1. Convert the raw data to useful format

During the alignment experiments, a number of information is stored, e.g., alignment performance data, and the actual alignments.

Due to a mistake of mine, each alignment is stored in a separate json. Having many small files is bad for storage, so run the following python script to join directories of alignment json files as one single file:

python src/repackage_results.py // remember to go in and replace the directories
  1. Create classification task csv file
python src/run_create_clf_data.py // once again need to specify the result directories, one thing to note is that a directory should have results of all algorithms

Extract the model-trace features

python src/run_extract_feature.py // change the directories in the file if necessary

Merge feature data and performance data

Run the jupyter notebook jupyter/merge-feature-data-and-performance-data.ipynb

Training predictive models

  • Dummy classifier
python src/run_dummy_clf.py -f [data.csv] -o [outdir]
  • Decision tree
python src/run_decision_tree_clf.py -f [data.csv] -n [n_folds] -o [outdir] // can go in file to change what parameters to optimize
  • Random forest
python src/run_random_forest.py -f [data.csv] -o [outdir] // can go in file to change range of number of estimators to search through

Producing confusion matrices

sh scripts/run_cnf_mat.sh

Helpful explanations and reminders

  • us: microseconds
  • clock time refers to the time from the start of the Java program till the end
  • traces are unique and multiple cases can have the same trace