README.md

The BioJava - Core Module

A tutorial for the core module of BioJava.

About

The core module of BioJava provides an API that provides Basic operations with biological sequences Reading and Writing of popular sequence file formats Translate DNA sequences into protein sequences

Index

This tutorial is split into several chapters.

Chapter 1 - Quick Installation

Chapter 2 - Basic Sequence types

Chapter 3 - Reading and Writing sequences

Chapter 4 - Translating DNA and protein sequences.

Please cite

BioJava: an open-source framework for bioinformatics in 2012
Andreas Prlic; Andrew Yates; Spencer E. Bliven; Peter W. Rose; Julius Jacobsen; Peter V. Troshin; Mark Chapman; Jianjiong Gao; Chuan Hock Koh; Sylvain Foisy; Richard Holland; Gediminas Rimsa; Michael L. Heuer; H. Brandstatter-Muller; Philip E. Bourne; Scooter Willis
Bioinformatics (2012) 28 (20): 2693-2695.

License

The content of this tutorial is available under the CC-BY license.

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