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create split fasta input channel from unbinned output #2

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dawnmy opened this issue Feb 15, 2024 · 0 comments

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dawnmy commented Feb 15, 2024 •

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mag/subworkflows/local/binning.nf

Line 141 in cbef376

if ( !params.skip_metabat2 & params.skip_maxbin2 ) {

ch_input_splitfasta = Channel.empty()

 if ( !params.skip_metabat2 ) {
        ch_input_splitfasta = ch_input_splitfasta.mix(METABAT2_METABAT2.out.unbinned)
 if ( !params.skip_maxbin2 ) {
        ch_input_splitfasta = ch_input_splitfasta.mix(MAXBIN2.out.unbinned_fasta)
 if ( !params.skip_metabinner ) {
        ch_input_splitfasta = ch_input_splitfasta.mix(METABINNER.out.unbinned_fasta)
}

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