From b5f4d74ea95306d08cf94271e820505b15658eaf Mon Sep 17 00:00:00 2001
From: Manuela Vanegas Ferro <44076078+manuvanegas@users.noreply.github.com>
Date: Fri, 25 Aug 2023 13:14:45 -0700
Subject: [PATCH] try to avoid copying `scripts` to apptainer image

---
 container.def     | 4 +---
 scripts/OneRun.jl | 2 +-
 2 files changed, 2 insertions(+), 4 deletions(-)

diff --git a/container.def b/container.def
index 39a162d..7311876 100644
--- a/container.def
+++ b/container.def
@@ -13,7 +13,6 @@ Vanegas-Ferro
 
 %files
     src /code/src
-    scripts /code/scripts
     install.jl /code
     Project.toml /code
     README.md /code
@@ -26,5 +25,4 @@ Vanegas-Ferro
 	chmod -R a+rX $JULIA_DEPOT_PATH /code
 
 %runscript
-	cd /code
-	julia --project="." "$@"
+	julia "$@"
diff --git a/scripts/OneRun.jl b/scripts/OneRun.jl
index 2d7dfe6..c26e4bf 100644
--- a/scripts/OneRun.jl
+++ b/scripts/OneRun.jl
@@ -1,6 +1,6 @@
 # Load Packages
 import Pkg
-Pkg.activate(".") 
+Pkg.activate("/code/.") 
 using Agents, CSV, DataFrames, Distributed, Statistics
 using SpatialRust